Strain Fitness in Shewanella loihica PV-4 around Shew_1335

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,545,379	-				-0.2
1,545,383	+				-0.3
1,545,383	+				-0.2
1,545,383	+				+0.4
1,545,391	-				+0.2
1,545,757	+		Shew_1334	0.41	-0.1
1,545,808	+		Shew_1334	0.46	-1.2
1,546,217	+		Shew_1334	0.86	+0.5
1,546,219	-		Shew_1334	0.86	-0.0
1,546,296	-				-0.3
1,546,329	-				-0.2
1,546,396	+		Shew_1335	0.19	+1.4
1,546,423	-		Shew_1335	0.29	+0.5
1,546,476	-		Shew_1335	0.49	+0.4
1,546,516	+		Shew_1335	0.64	+0.0
1,546,516	+		Shew_1335	0.64	+0.5
1,546,524	-		Shew_1335	0.67	+0.6
1,546,698	+				+0.1
1,546,726	+				-0.1
1,546,739	-		Shew_1336	0.10	+0.6
1,546,796	+		Shew_1336	0.15	+0.4
1,546,804	-		Shew_1336	0.15	-0.6
1,546,805	-		Shew_1336	0.15	+0.2
1,546,922	-		Shew_1336	0.24	+0.2
1,546,954	+		Shew_1336	0.27	+1.0
1,547,002	-		Shew_1336	0.31	+1.2
1,547,040	+		Shew_1336	0.33	+0.5
1,547,045	-		Shew_1336	0.34	-0.1
1,547,048	-		Shew_1336	0.34	+1.5
1,547,048	+		Shew_1336	0.34	+0.6
1,547,199	-		Shew_1336	0.46	-0.1
1,547,263	+		Shew_1336	0.51	+0.4
1,547,425	-		Shew_1336	0.63	+0.3
1,547,457	+		Shew_1336	0.66	-0.4
1,547,465	-		Shew_1336	0.66	-0.4
1,547,551	+		Shew_1336	0.73	+0.1
1,547,551	+		Shew_1336	0.73	-0.0
1,547,551	+		Shew_1336	0.73	+1.2