Strain Fitness in Shewanella loihica PV-4 around Shew_0936

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,071,849	-		Shew_0935	0.76	+0.3
1,071,873	+		Shew_0935	0.76	-0.2
1,071,881	-		Shew_0935	0.76	+0.8
1,072,164	+		Shew_0935	0.84	-0.1
1,072,290	-		Shew_0935	0.88	-0.9
1,072,414	-				+0.6
1,072,658	-				+2.0
1,072,929	-				+0.1
1,073,309	+		Shew_0936	0.13	+0.1
1,073,478	-		Shew_0936	0.18	+0.2
1,073,612	+		Shew_0936	0.21	+0.8
1,073,612	+		Shew_0936	0.21	+0.1
1,073,612	+		Shew_0936	0.21	-0.0
1,073,612	+		Shew_0936	0.21	+0.0
1,073,620	-		Shew_0936	0.22	+0.1
1,073,620	-		Shew_0936	0.22	+0.1
1,073,620	-		Shew_0936	0.22	-0.3
1,073,827	+		Shew_0936	0.27	+0.7
1,074,070	+		Shew_0936	0.34	+0.4
1,074,153	+		Shew_0936	0.36	+0.2
1,074,457	-		Shew_0936	0.44	+1.6
1,074,462	-		Shew_0936	0.44	+0.1
1,074,580	+		Shew_0936	0.47	-0.2
1,074,819	-		Shew_0936	0.54	+0.3
1,074,847	+		Shew_0936	0.54	+0.2
1,074,921	-		Shew_0936	0.56	+0.3
1,075,059	-		Shew_0936	0.60	-0.3
1,075,108	+		Shew_0936	0.61	+0.6
1,075,341	+		Shew_0936	0.67	+0.2
1,075,501	+		Shew_0936	0.72	+0.0
1,075,506	+		Shew_0936	0.72	-0.3
1,075,658	+		Shew_0936	0.76	+0.3
1,075,762	+		Shew_0936	0.79	+0.7
1,076,023	-		Shew_0936	0.86	-0.0
1,076,102	-		Shew_0936	0.88	+0.3
1,076,104	+		Shew_0936	0.88	+0.3
1,076,183	-		Shew_0936	0.90	+0.1
1,076,223	+				-0.1
1,076,282	-				-1.3
1,076,308	-				+0.7
1,076,424	-				-0.1
1,076,443	+				-0.5
1,076,456	-				+1.5
1,076,790	+				+0.0
1,076,798	-				-0.2
1,076,954	+		Shew_0937	0.10	+0.2
1,077,550	-		Shew_0937	0.39	-0.8
1,077,557	+		Shew_0937	0.39	+0.1