Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_916

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,075,474	-		Pf6N2E2_915	0.58	-0.8
1,075,598	+				+0.9
1,075,598	+				-0.4
1,075,598	+				-1.9
1,075,602	+				+0.9
1,075,602	+				+0.9
1,075,603	-				+1.9
1,075,603	-				-0.6
1,075,739	+				-0.3
1,075,740	-				+1.6
1,075,883	+				+0.3
1,075,884	-				-2.1
1,075,884	-				-1.6
1,075,884	-				-1.3
1,075,901	-				-1.4
1,076,024	+				-1.3
1,076,025	-				+0.3
1,076,128	-				+0.5
1,076,202	+				+0.0
1,076,203	-				+0.7
1,076,219	+				-0.9
1,076,219	+				+0.0
1,076,219	+				-0.1
1,076,220	-				-0.3
1,076,220	-				-1.0
1,076,238	+				+0.2
1,076,239	-				-0.2
1,076,390	-				+0.3
1,076,408	-				+0.8
1,076,408	-				+0.3
1,076,419	+				+0.4
1,076,419	+				+0.0
1,076,438	-				-1.3
1,076,438	-				+1.3
1,076,438	-				-0.6
1,076,441	+				-0.4
1,076,441	+				+0.9
1,076,442	-				-0.1
1,076,485	+				+1.2
1,076,549	+				+1.8
1,076,549	+				-0.3
1,076,573	+				-0.2
1,076,646	+		Pf6N2E2_916	0.12	+0.1
1,076,647	-		Pf6N2E2_916	0.12	+0.6
1,076,647	-		Pf6N2E2_916	0.12	+2.5
1,076,736	+		Pf6N2E2_916	0.17	+1.3
1,076,736	+		Pf6N2E2_916	0.17	+1.3
1,076,736	+		Pf6N2E2_916	0.17	+0.8
1,076,736	+		Pf6N2E2_916	0.17	+0.7
1,076,736	+		Pf6N2E2_916	0.17	+0.9
1,076,737	-		Pf6N2E2_916	0.17	+0.2
1,076,801	+		Pf6N2E2_916	0.22	+1.2
1,076,801	+		Pf6N2E2_916	0.22	+0.6
1,076,802	-		Pf6N2E2_916	0.22	+0.9
1,076,848	-		Pf6N2E2_916	0.25	+0.8
1,076,851	+		Pf6N2E2_916	0.25	+0.7
1,076,851	+		Pf6N2E2_916	0.25	-0.5
1,077,039	+		Pf6N2E2_916	0.37	+0.4
1,077,040	-		Pf6N2E2_916	0.37	-0.5
1,077,048	+		Pf6N2E2_916	0.38	-0.3
1,077,049	-		Pf6N2E2_916	0.38	-0.3
1,077,298	-		Pf6N2E2_916	0.54	+1.4
1,077,339	+		Pf6N2E2_916	0.57	+1.0
1,077,340	-		Pf6N2E2_916	0.57	+0.4
1,077,340	-		Pf6N2E2_916	0.57	+1.3
1,077,340	-		Pf6N2E2_916	0.57	+0.1
1,077,340	-		Pf6N2E2_916	0.57	-0.8
1,077,364	-		Pf6N2E2_916	0.58	+0.9
1,077,364	-		Pf6N2E2_916	0.58	+1.9
1,077,445	-		Pf6N2E2_916	0.63	+1.0
1,077,489	-		Pf6N2E2_916	0.66	-0.5
1,077,489	-		Pf6N2E2_916	0.66	+0.5
1,077,646	+		Pf6N2E2_916	0.77	+0.9
1,077,646	+		Pf6N2E2_916	0.77	+0.7
1,077,646	+		Pf6N2E2_916	0.77	+1.2
1,077,647	-		Pf6N2E2_916	0.77	-0.7
1,077,647	-		Pf6N2E2_916	0.77	-0.8
1,077,656	-		Pf6N2E2_916	0.77	+0.4
1,077,784	-		Pf6N2E2_916	0.86	+1.8
1,077,973	-				+1.1
1,077,984	+				+0.7
1,077,985	-				+1.1
1,078,043	+				+1.3
1,078,043	+				+0.3
1,078,137	+				-1.0
1,078,138	-				+0.8
1,078,151	+				+0.9
1,078,178	+				-1.4
1,078,221	+				+1.3
1,078,252	+				+0.4
1,078,252	+				+0.7
1,078,252	+				-2.3
1,078,255	+				+0.4
1,078,256	-				-1.0
1,078,483	+		Pf6N2E2_917	0.12	-2.0
1,078,483	+		Pf6N2E2_917	0.12	+0.6
1,078,492	+		Pf6N2E2_917	0.12	+0.7
1,078,492	+		Pf6N2E2_917	0.12	-0.3
1,078,492	+		Pf6N2E2_917	0.12	+0.4
1,078,492	+		Pf6N2E2_917	0.12	-1.2
1,078,492	+		Pf6N2E2_917	0.12	+1.3
1,078,492	+		Pf6N2E2_917	0.12	-0.9
1,078,492	+		Pf6N2E2_917	0.12	+0.4
1,078,493	-		Pf6N2E2_917	0.12	+0.7
1,078,493	-		Pf6N2E2_917	0.12	+0.3
1,078,595	-		Pf6N2E2_917	0.20	-0.4
1,078,600	+		Pf6N2E2_917	0.21	+0.2
1,078,600	+		Pf6N2E2_917	0.21	+0.7
1,078,750	-		Pf6N2E2_917	0.32	-0.1
1,078,986	+		Pf6N2E2_917	0.50	-0.5
1,078,986	+		Pf6N2E2_917	0.50	-1.0
1,078,999	-		Pf6N2E2_917	0.51	+0.7