Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_756

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
865,522	+		Pf6N2E2_755	0.65	-0.5
865,777	+		Pf6N2E2_755	0.79	+0.8
865,777	+		Pf6N2E2_755	0.79	-0.1
865,778	-		Pf6N2E2_755	0.79	+1.6
865,778	-		Pf6N2E2_755	0.79	+0.7
865,778	-		Pf6N2E2_755	0.79	+0.9
865,778	-		Pf6N2E2_755	0.79	+1.1
865,790	-		Pf6N2E2_755	0.80	+1.4
865,859	-		Pf6N2E2_755	0.84	+1.4
865,870	+		Pf6N2E2_755	0.85	+0.6
865,871	-		Pf6N2E2_755	0.85	+1.6
866,057	-				+0.1
866,211	+				-0.1
866,211	+				+0.0
866,211	+				-1.8
866,224	+				-1.3
866,224	+				+0.9
866,224	+				-0.0
866,224	+				+0.6
866,225	-				-1.9
866,228	-				+0.8
866,420	+				-2.2
866,421	-				+1.8
866,421	-				+2.0
866,453	+				+1.3
866,453	+				-0.9
866,454	-				+0.4
866,454	-				+1.1
866,593	+		Pf6N2E2_756	0.47	-2.3
866,593	+		Pf6N2E2_756	0.47	+0.0
866,594	-		Pf6N2E2_756	0.47	+2.3
866,594	-		Pf6N2E2_756	0.47	+1.8
866,615	-		Pf6N2E2_756	0.59	+1.0
866,645	+		Pf6N2E2_756	0.76	-1.9
866,646	-		Pf6N2E2_756	0.77	+2.3
866,646	-		Pf6N2E2_756	0.77	+1.2
866,646	-		Pf6N2E2_756	0.77	+0.9
866,646	-		Pf6N2E2_756	0.77	+1.6
866,706	+				-1.9
866,706	+				-0.4
866,707	-				+2.1
866,715	+				-0.1
866,715	+				-1.5
866,715	+				-0.7
866,715	+				-2.3
866,715	+				-1.1
866,715	+				-1.2
866,716	-				+0.1
866,716	-				+0.5
866,716	-				+0.8
866,717	+				-1.6
866,717	+				-2.1
866,717	+				-0.3
866,717	+				-1.9
866,718	-				+1.9
866,718	-				+0.1
866,718	-				+1.6
866,718	-				+0.7
866,718	-				+3.1
866,733	-				+2.0
866,733	-				+2.3
866,749	+				-0.6
866,750	-				+0.2
866,753	-				+2.2
866,863	-				+2.8
866,873	+				-0.2
866,873	+				-0.3
866,874	-				+1.8
866,910	-				+2.4
866,917	-				+1.1
866,929	+				+0.4
866,929	+				-2.8
866,930	-				+2.0
866,935	+				-1.1
866,935	+				-0.6
866,935	+				-0.3
866,935	+				-0.3
866,936	-				+1.4
866,936	-				+1.2
866,941	+				+1.1
866,944	+				+0.6
866,945	-				+2.2
867,044	+				+0.4
867,045	-				+0.1
867,225	+		Pf6N2E2_757	0.27	+0.9
867,225	+		Pf6N2E2_757	0.27	+2.4
867,225	+		Pf6N2E2_757	0.27	+1.9
867,226	-		Pf6N2E2_757	0.27	-0.9
867,226	-		Pf6N2E2_757	0.27	+1.3
867,226	-		Pf6N2E2_757	0.27	+1.6
867,248	+		Pf6N2E2_757	0.29	+0.3
867,248	+		Pf6N2E2_757	0.29	+1.4
867,249	-		Pf6N2E2_757	0.29	+1.7
867,249	-		Pf6N2E2_757	0.29	+2.4
867,251	+		Pf6N2E2_757	0.30	+2.9
867,251	+		Pf6N2E2_757	0.30	+1.9
867,251	+		Pf6N2E2_757	0.30	+2.7
867,252	-		Pf6N2E2_757	0.30	+1.6
867,252	-		Pf6N2E2_757	0.30	+2.5
867,302	+		Pf6N2E2_757	0.35	+1.4
867,302	+		Pf6N2E2_757	0.35	+0.3
867,486	-		Pf6N2E2_757	0.54	+0.7
867,549	-		Pf6N2E2_757	0.60	+2.0