Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6057

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,875,860	+		Pf6N2E2_6056	0.51	+0.5
6,875,920	+		Pf6N2E2_6056	0.55	+0.2
6,875,920	+		Pf6N2E2_6056	0.55	-0.4
6,875,921	-		Pf6N2E2_6056	0.55	+0.4
6,875,940	-		Pf6N2E2_6056	0.56	-0.6
6,875,941	+		Pf6N2E2_6056	0.57	+3.0
6,875,941	+		Pf6N2E2_6056	0.57	-0.3
6,875,941	+		Pf6N2E2_6056	0.57	-0.5
6,875,941	+		Pf6N2E2_6056	0.57	+2.0
6,875,942	-		Pf6N2E2_6056	0.57	-1.7
6,875,942	-		Pf6N2E2_6056	0.57	-0.2
6,875,942	-		Pf6N2E2_6056	0.57	+0.2
6,875,942	-		Pf6N2E2_6056	0.57	+0.7
6,875,971	+		Pf6N2E2_6056	0.59	-0.5
6,875,971	+		Pf6N2E2_6056	0.59	+0.2
6,876,148	+		Pf6N2E2_6056	0.72	+0.6
6,876,149	-		Pf6N2E2_6056	0.72	+0.3
6,876,229	+		Pf6N2E2_6056	0.78	-0.0
6,876,229	+		Pf6N2E2_6056	0.78	-0.4
6,876,230	-		Pf6N2E2_6056	0.78	+0.1
6,876,230	-		Pf6N2E2_6056	0.78	-0.1
6,876,230	-		Pf6N2E2_6056	0.78	+0.9
6,876,283	-		Pf6N2E2_6056	0.82	-1.4
6,876,297	+		Pf6N2E2_6056	0.83	-0.6
6,876,297	+		Pf6N2E2_6056	0.83	-1.4
6,876,298	-		Pf6N2E2_6056	0.83	+0.6
6,876,298	-		Pf6N2E2_6056	0.83	-1.7
6,876,472	+				+0.1
6,876,507	+				+0.5
6,876,507	+				+0.3
6,876,508	-				-0.3
6,876,508	-				+0.8
6,876,564	+				-0.3
6,876,564	+				-0.3
6,876,564	+				-0.6
6,876,565	-				+0.9
6,876,588	-				-0.6
6,876,608	+				-0.4
6,876,608	+				-0.2
6,876,608	+				-0.1
6,876,608	+				-0.2
6,876,608	+				+1.0
6,876,608	+				+2.3
6,876,608	+				-2.2
6,876,608	+				+0.2
6,876,608	+				+0.3
6,876,608	+				+1.0
6,876,609	-				-0.4
6,876,609	-				+0.4
6,876,612	+				+0.0
6,876,612	+				-1.5
6,876,612	+				+0.6
6,876,612	+				+1.1
6,876,612	+				+0.6
6,876,613	-				+0.1
6,876,834	-				-0.9
6,877,046	-		Pf6N2E2_6057	0.24	-1.9
6,877,066	+				-1.1
6,877,066	+		Pf6N2E2_6057	0.26	-1.9
6,877,067	-		Pf6N2E2_6057	0.26	-3.4
6,877,067	-		Pf6N2E2_6057	0.26	-2.3
6,877,067	-		Pf6N2E2_6057	0.26	-1.1
6,877,711	+				-1.9
6,877,711	+				-3.4
6,877,712	-				-0.1
6,877,712	-				-2.3
6,877,712	-				-2.4
6,877,712	-				-2.9
6,877,723	+				-2.4
6,877,723	+				-1.1
6,877,733	+				-3.5
6,877,926	+				-2.3
6,877,926	+				-2.9
6,877,927	-				-1.7
6,878,622	+		Pf6N2E2_6058	0.55	-3.7
6,878,623	-		Pf6N2E2_6058	0.55	-3.9