Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5919

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,737,118	+				+0.3
6,737,119	-				-0.7
6,737,119	-				+0.4
6,737,122	+				-0.3
6,737,122	+				+0.1
6,737,123	-				+0.0
6,737,123	-				+0.4
6,737,158	-				-0.9
6,737,280	+				+0.9
6,737,281	-				-0.1
6,737,281	-				-0.2
6,737,281	-				+1.1
6,737,283	+				+0.6
6,737,308	-				+0.0
6,737,440	+				+0.4
6,737,440	+				-0.4
6,737,440	+				+1.5
6,737,440	+				+0.2
6,737,441	-				+1.1
6,737,441	-				+1.7
6,737,441	-				-0.2
6,737,441	-				+0.9
6,737,441	-				-0.1
6,737,441	-				-0.1
6,737,441	-				+0.4
6,737,441	-				-1.1
6,737,441	-				+0.7
6,737,441	-				+0.3
6,737,585	+				+1.1
6,737,585	+				-2.4
6,737,585	+				+1.2
6,737,647	-				+0.6
6,737,706	+				-0.2
6,737,707	-				-0.6
6,737,707	-				+0.4
6,737,707	-				+0.1
6,737,707	-				+0.3
6,737,707	-				+0.1
6,737,764	+				-2.0
6,737,765	-				-1.5
6,737,765	-				-0.4
6,737,765	-				+2.2
6,738,091	-				-3.3
6,738,098	+				-0.1
6,738,098	+				+0.6
6,738,098	+				-0.7
6,738,098	+				+0.5
6,738,098	+				+0.2
6,738,099	-				-3.1
6,738,099	-				-2.6
6,738,276	-		Pf6N2E2_5919	0.23	-2.1
6,738,384	-		Pf6N2E2_5919	0.37	-2.5
6,738,449	+		Pf6N2E2_5919	0.45	+0.4
6,738,653	+		Pf6N2E2_5919	0.72	+0.3
6,738,654	-		Pf6N2E2_5919	0.72	-1.0
6,738,815	+				+0.4
6,738,816	-				-1.5
6,738,916	+				-0.4
6,738,916	+				-1.2
6,738,916	+				-0.5
6,738,916	+				-0.3
6,738,916	+				+0.7
6,738,917	-				-1.7
6,738,917	-				-0.2
6,738,920	+				+0.6
6,738,920	+				+0.7
6,738,920	+				+0.4
6,738,920	+				+0.6
6,738,920	+				+0.1
6,738,920	+				-0.7
6,738,920	+				-0.4
6,738,920	+				+0.3
6,738,920	+				-1.1
6,738,921	-				-2.1
6,738,921	-				+0.2
6,738,921	-				+0.6
6,738,921	-				-2.3
6,738,921	-				-2.5
6,738,921	-				-0.5
6,738,921	-				+1.3
6,738,921	-				-1.0
6,738,921	-				-1.0
6,738,921	-				+0.3
6,738,940	+				-0.8
6,738,941	-				+0.9
6,739,343	-		Pf6N2E2_5920	0.39	-0.1
6,739,457	+		Pf6N2E2_5920	0.48	+0.8
6,739,459	+		Pf6N2E2_5920	0.48	+0.2
6,739,505	+		Pf6N2E2_5920	0.52	-2.5
6,739,506	-		Pf6N2E2_5920	0.52	+0.3
6,739,722	+		Pf6N2E2_5920	0.70	-1.2
6,739,723	-		Pf6N2E2_5920	0.70	-1.6
6,739,789	-		Pf6N2E2_5920	0.75	+0.9