Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5892

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,709,839	+		Pf6N2E2_5890	0.70	-0.4
6,709,933	-		Pf6N2E2_5890	0.79	-0.3
6,709,955	+		Pf6N2E2_5890	0.81	+0.8
6,709,956	-		Pf6N2E2_5890	0.82	+0.3
6,710,015	+		Pf6N2E2_5890	0.87	+0.2
6,710,016	-		Pf6N2E2_5890	0.87	+0.1
6,710,116	+				-0.1
6,710,116	+				+0.6
6,710,117	-				-0.2
6,710,245	+				+0.8
6,710,246	-				+0.5
6,710,326	+				+0.7
6,710,326	+				+1.0
6,710,326	+				+1.8
6,710,327	-				+0.5
6,710,492	+				+0.9
6,710,492	+				+1.1
6,710,492	+				+1.8
6,710,492	+				+0.2
6,710,493	-				-0.4
6,710,493	-				-1.1
6,710,493	-				+0.3
6,710,652	-				-0.1
6,710,820	+		Pf6N2E2_5892	0.11	+0.3
6,711,096	+		Pf6N2E2_5892	0.25	-1.7
6,711,096	+		Pf6N2E2_5892	0.25	+2.0
6,711,097	-		Pf6N2E2_5892	0.25	+0.2
6,711,097	-		Pf6N2E2_5892	0.25	+0.2
6,711,097	-		Pf6N2E2_5892	0.25	+1.1
6,711,097	-		Pf6N2E2_5892	0.25	-0.3
6,711,097	-		Pf6N2E2_5892	0.25	+0.7
6,711,097	-		Pf6N2E2_5892	0.25	-0.4
6,711,097	-		Pf6N2E2_5892	0.25	+2.0
6,711,097	-		Pf6N2E2_5892	0.25	+0.7
6,711,097	-		Pf6N2E2_5892	0.25	-2.1
6,711,097	-		Pf6N2E2_5892	0.25	+0.8
6,711,097	-		Pf6N2E2_5892	0.25	+0.3
6,711,099	-		Pf6N2E2_5892	0.25	-0.9
6,711,167	-		Pf6N2E2_5892	0.28	+0.4
6,711,325	-		Pf6N2E2_5892	0.36	+0.1
6,711,356	+		Pf6N2E2_5892	0.38	+1.5
6,711,387	+		Pf6N2E2_5892	0.39	-0.2
6,711,388	-		Pf6N2E2_5892	0.39	+0.1
6,711,420	+		Pf6N2E2_5892	0.41	-0.2
6,711,737	+		Pf6N2E2_5892	0.57	+0.4
6,711,738	-		Pf6N2E2_5892	0.57	+0.9
6,711,983	+		Pf6N2E2_5892	0.70	+0.1
6,711,983	+		Pf6N2E2_5892	0.70	+0.3
6,711,983	+		Pf6N2E2_5892	0.70	-0.6
6,711,983	+		Pf6N2E2_5892	0.70	-0.5
6,711,984	-		Pf6N2E2_5892	0.70	+2.2
6,712,333	+		Pf6N2E2_5892	0.87	+0.6
6,712,333	+		Pf6N2E2_5892	0.87	+0.1
6,712,333	+		Pf6N2E2_5892	0.87	+0.9
6,712,359	-		Pf6N2E2_5892	0.89	+0.3
6,712,631	+				+1.7
6,712,631	+				+0.5
6,712,632	-				+0.4
6,712,632	-				+1.3
6,712,639	+				-0.1
6,712,639	+				+1.3
6,712,645	-				+1.7
6,712,776	-				+1.0
6,712,785	-				-0.3
6,712,920	-		Pf6N2E2_5893	0.19	-0.1
6,712,937	+		Pf6N2E2_5893	0.21	-2.2
6,712,937	+		Pf6N2E2_5893	0.21	-1.0
6,712,937	+		Pf6N2E2_5893	0.21	+0.1
6,712,938	-		Pf6N2E2_5893	0.21	+0.7
6,712,938	-		Pf6N2E2_5893	0.21	+0.7
6,712,967	+		Pf6N2E2_5893	0.25	+0.0
6,712,967	+		Pf6N2E2_5893	0.25	-0.9
6,712,968	-		Pf6N2E2_5893	0.25	+1.0
6,712,968	-		Pf6N2E2_5893	0.25	+0.3
6,713,415	+		Pf6N2E2_5893	0.84	-0.4
6,713,416	-		Pf6N2E2_5893	0.84	-0.2
6,713,431	+		Pf6N2E2_5893	0.86	+1.4
6,713,432	-		Pf6N2E2_5893	0.86	-0.8
6,713,432	-		Pf6N2E2_5893	0.86	+0.3
6,713,432	-		Pf6N2E2_5893	0.86	+0.6
6,713,432	-		Pf6N2E2_5893	0.86	-1.1
6,713,432	-		Pf6N2E2_5893	0.86	+1.5
6,713,483	+				+0.2
6,713,483	+				-0.1
6,713,484	-				-2.7
6,713,484	-				-1.3
6,713,562	+				-0.7