Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5860

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,679,837	+				+0.6
6,679,837	+				+0.6
6,679,838	-				+0.4
6,679,849	+				-0.6
6,679,935	+				+0.2
6,679,936	-				+0.2
6,679,944	-				-0.5
6,679,944	-				-1.5
6,679,944	-				-1.2
6,679,975	-				-0.5
6,679,975	-				+0.1
6,679,986	+				+2.1
6,680,064	-				-0.7
6,680,140	+				-0.8
6,680,420	+		Pf6N2E2_5860	0.20	-0.7
6,680,525	+		Pf6N2E2_5860	0.28	-0.0
6,680,526	-		Pf6N2E2_5860	0.28	-1.8
6,680,537	+		Pf6N2E2_5860	0.29	-0.1
6,680,537	+		Pf6N2E2_5860	0.29	+0.4
6,680,537	+		Pf6N2E2_5860	0.29	-2.6
6,680,537	+				-0.1
6,680,537	+		Pf6N2E2_5860	0.29	-0.8
6,680,693	+		Pf6N2E2_5860	0.41	+1.2
6,680,693	+		Pf6N2E2_5860	0.41	-1.4
6,680,693	+		Pf6N2E2_5860	0.41	-1.7
6,680,694	-		Pf6N2E2_5860	0.41	-1.2
6,680,694	-		Pf6N2E2_5860	0.41	+0.8
6,680,694	-		Pf6N2E2_5860	0.41	-0.9
6,680,694	-		Pf6N2E2_5860	0.41	-1.7
6,680,694	-		Pf6N2E2_5860	0.41	-0.9
6,680,694	-		Pf6N2E2_5860	0.41	-1.0
6,680,698	-		Pf6N2E2_5860	0.41	-0.7
6,680,698	-		Pf6N2E2_5860	0.41	-2.4
6,680,879	+		Pf6N2E2_5860	0.55	-0.6
6,680,879	+		Pf6N2E2_5860	0.55	-0.1
6,680,879	+		Pf6N2E2_5860	0.55	-1.3
6,680,880	-		Pf6N2E2_5860	0.55	+0.1
6,680,960	+		Pf6N2E2_5860	0.61	-0.8
6,680,960	+		Pf6N2E2_5860	0.61	-0.1
6,680,960	+		Pf6N2E2_5860	0.61	-1.1
6,681,092	+				+0.9
6,681,093	-		Pf6N2E2_5860	0.71	+0.0
6,681,093	-		Pf6N2E2_5860	0.71	-2.2
6,681,194	+		Pf6N2E2_5860	0.79	+0.1
6,681,194	+		Pf6N2E2_5860	0.79	-2.2
6,681,195	-		Pf6N2E2_5860	0.79	-2.7
6,681,653	-				+0.6
6,681,673	+				-0.8
6,681,673	+				-0.4
6,681,673	+				-0.3
6,681,674	-				+0.5
6,681,674	-				+1.0
6,681,674	-				+0.4
6,681,674	-				+1.2
6,681,674	-				+0.4
6,681,674	-				-1.1
6,681,674	-				+1.1
6,681,955	-		Pf6N2E2_5861	0.36	-1.4
6,681,996	+		Pf6N2E2_5861	0.42	+0.9
6,681,996	+		Pf6N2E2_5861	0.42	+1.1
6,681,996	+		Pf6N2E2_5861	0.42	+1.0
6,681,996	+		Pf6N2E2_5861	0.42	+0.9
6,681,996	+		Pf6N2E2_5861	0.42	+1.0
6,681,996	+		Pf6N2E2_5861	0.42	+1.6
6,681,996	+		Pf6N2E2_5861	0.42	+0.8
6,681,997	-		Pf6N2E2_5861	0.42	+1.3
6,681,997	-		Pf6N2E2_5861	0.42	+0.3
6,681,997	-		Pf6N2E2_5861	0.42	+0.8
6,681,997	-		Pf6N2E2_5861	0.42	+2.2
6,681,997	-		Pf6N2E2_5861	0.42	+1.1
6,681,997	-		Pf6N2E2_5861	0.42	+0.8
6,682,067	+		Pf6N2E2_5861	0.52	+1.2
6,682,104	-		Pf6N2E2_5861	0.57	+0.9
6,682,104	-		Pf6N2E2_5861	0.57	+0.1
6,682,104	-		Pf6N2E2_5861	0.57	+1.3
6,682,104	-		Pf6N2E2_5861	0.57	+0.7
6,682,247	+		Pf6N2E2_5861	0.76	+1.1
6,682,251	-		Pf6N2E2_5861	0.77	+1.2
6,682,294	-		Pf6N2E2_5861	0.82	+1.4
6,682,294	-		Pf6N2E2_5861	0.82	+0.3
6,682,332	-		Pf6N2E2_5861	0.88	-0.3
6,682,332	-		Pf6N2E2_5861	0.88	+0.5
6,682,332	-		Pf6N2E2_5861	0.88	+0.5
6,682,373	+				-1.7
6,682,373	+				+0.4
6,682,373	+				+1.2
6,682,373	+				+0.8
6,682,373	+				-0.1
6,682,373	+				+1.1
6,682,373	+				-0.7
6,682,373	+				+0.4
6,682,374	-				+0.7
6,682,374	-				+1.5
6,682,374	-				+2.9
6,682,374	-				-0.1
6,682,374	-				+2.4
6,682,374	-				-0.8
6,682,375	+				+1.2
6,682,376	-				+1.2