Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5822

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,638,930	+		Pf6N2E2_5821	0.14	-0.5
6,639,091	+		Pf6N2E2_5821	0.31	+0.1
6,639,092	-		Pf6N2E2_5821	0.31	-0.9
6,639,092	-		Pf6N2E2_5821	0.31	+0.6
6,639,092	-		Pf6N2E2_5821	0.31	+0.2
6,639,099	+		Pf6N2E2_5821	0.31	+0.3
6,639,100	-		Pf6N2E2_5821	0.32	-0.1
6,639,100	-		Pf6N2E2_5821	0.32	-0.9
6,639,100	-		Pf6N2E2_5821	0.32	+0.9
6,639,406	+		Pf6N2E2_5821	0.63	-0.1
6,639,406	+		Pf6N2E2_5821	0.63	+1.7
6,639,406	+		Pf6N2E2_5821	0.63	-0.3
6,639,406	+		Pf6N2E2_5821	0.63	+0.1
6,639,406	+		Pf6N2E2_5821	0.63	-0.3
6,639,406	+		Pf6N2E2_5821	0.63	-1.1
6,639,406	+		Pf6N2E2_5821	0.63	-0.4
6,639,406	+		Pf6N2E2_5821	0.63	-1.1
6,639,406	+		Pf6N2E2_5821	0.63	+0.8
6,639,407	-		Pf6N2E2_5821	0.63	-0.8
6,639,407	-		Pf6N2E2_5821	0.63	-0.7
6,639,407	-		Pf6N2E2_5821	0.63	+0.4
6,639,407	-		Pf6N2E2_5821	0.63	-0.6
6,639,407	-		Pf6N2E2_5821	0.63	+0.6
6,639,573	-		Pf6N2E2_5821	0.81	-0.1
6,639,731	+				+1.3
6,639,732	-				+0.3
6,639,732	-				-0.3
6,639,732	-				+0.8
6,639,738	+				+0.7
6,639,738	+				+0.2
6,639,739	-				-0.1
6,639,739	-				+1.1
6,639,739	-				+0.3
6,639,739	-				-2.0
6,639,825	+				-1.0
6,639,842	+				-0.2
6,639,842	+				-1.4
6,639,842	+				-0.1
6,639,842	+				-1.7
6,639,842	+				+0.8
6,639,843	-				-1.9
6,639,843	-				+0.1
6,639,843	-				+0.5
6,639,843	-				+0.1
6,639,844	+				-1.1
6,640,982	+				-0.6
6,641,046	-				-1.5
6,641,046	-				+0.2
6,641,066	+				+0.6
6,641,066	+				-0.3
6,641,067	-				+0.5
6,641,067	-				+0.9
6,641,067	-				+0.5
6,641,075	+				+0.2
6,641,076	-				-1.4
6,641,117	+				+1.2
6,641,200	+		Pf6N2E2_5823	0.15	-1.2
6,641,200	+		Pf6N2E2_5823	0.15	-0.3
6,641,222	+		Pf6N2E2_5823	0.17	+0.8
6,641,222	+		Pf6N2E2_5823	0.17	-0.3
6,641,222	+		Pf6N2E2_5823	0.17	-1.2
6,641,222	+		Pf6N2E2_5823	0.17	-1.6
6,641,222	+		Pf6N2E2_5823	0.17	-0.9
6,641,223	-		Pf6N2E2_5823	0.17	-0.1
6,641,223	-		Pf6N2E2_5823	0.17	+0.5
6,641,223	-		Pf6N2E2_5823	0.17	+0.1
6,641,223	-		Pf6N2E2_5823	0.17	+2.1
6,641,381	-		Pf6N2E2_5823	0.31	+0.8
6,641,505	-		Pf6N2E2_5823	0.41	+0.9
6,641,521	-		Pf6N2E2_5823	0.43	+0.2
6,641,521	-		Pf6N2E2_5823	0.43	-0.1
6,641,610	+		Pf6N2E2_5823	0.51	+0.8
6,641,610	+		Pf6N2E2_5823	0.51	+1.3
6,641,645	+		Pf6N2E2_5823	0.54	+1.2
6,641,645	+		Pf6N2E2_5823	0.54	-0.2
6,641,645	+		Pf6N2E2_5823	0.54	+1.1
6,641,645	+		Pf6N2E2_5823	0.54	-0.7
6,641,645	+		Pf6N2E2_5823	0.54	-0.8
6,641,645	+		Pf6N2E2_5823	0.54	+0.9
6,641,646	-		Pf6N2E2_5823	0.54	-1.3
6,641,646	-		Pf6N2E2_5823	0.54	-1.3
6,641,646	-		Pf6N2E2_5823	0.54	-1.4
6,641,646	-		Pf6N2E2_5823	0.54	-0.5
6,641,647	+		Pf6N2E2_5823	0.54	-0.1
6,641,647	+		Pf6N2E2_5823	0.54	+0.0
6,641,647	+		Pf6N2E2_5823	0.54	-0.7
6,641,647	+		Pf6N2E2_5823	0.54	+0.9
6,641,648	-		Pf6N2E2_5823	0.54	+1.7
6,641,648	-		Pf6N2E2_5823	0.54	-0.3
6,641,648	-		Pf6N2E2_5823	0.54	+0.9
6,641,684	+		Pf6N2E2_5823	0.57	+0.7
6,641,685	-		Pf6N2E2_5823	0.57	+0.4
6,641,685	-		Pf6N2E2_5823	0.57	-0.1
6,641,685	-		Pf6N2E2_5823	0.57	+0.8
6,641,685	-		Pf6N2E2_5823	0.57	-0.1
6,641,687	+		Pf6N2E2_5823	0.57	-0.5
6,641,687	+		Pf6N2E2_5823	0.57	-0.1
6,641,687	+		Pf6N2E2_5823	0.57	-0.8
6,641,688	-		Pf6N2E2_5823	0.57	+1.3
6,641,688	-		Pf6N2E2_5823	0.57	-0.2
6,641,688	-		Pf6N2E2_5823	0.57	-1.2
6,641,723	+		Pf6N2E2_5823	0.60	+0.5
6,641,723	+		Pf6N2E2_5823	0.60	+0.6