Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5679

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,491,999	+				-0.7
6,491,999	+				-0.6
6,492,024	+				-0.2
6,492,256	+		Pf6N2E2_5678	0.14	-1.0
6,492,256	+		Pf6N2E2_5678	0.14	+0.2
6,492,256	+		Pf6N2E2_5678	0.14	-0.2
6,492,256	+		Pf6N2E2_5678	0.14	-0.2
6,492,256	+		Pf6N2E2_5678	0.14	+0.1
6,492,256	+		Pf6N2E2_5678	0.14	+0.6
6,492,256	+		Pf6N2E2_5678	0.14	-0.0
6,492,256	+		Pf6N2E2_5678	0.14	-1.0
6,492,256	+		Pf6N2E2_5678	0.14	-1.2
6,492,257	-		Pf6N2E2_5678	0.14	+1.3
6,492,257	-		Pf6N2E2_5678	0.14	+0.2
6,492,257	-		Pf6N2E2_5678	0.14	+0.1
6,492,257	-		Pf6N2E2_5678	0.14	+1.2
6,492,257	-		Pf6N2E2_5678	0.14	+1.0
6,492,257	-		Pf6N2E2_5678	0.14	+1.0
6,492,257	-		Pf6N2E2_5678	0.14	+0.6
6,492,260	+		Pf6N2E2_5678	0.15	+0.6
6,492,260	+		Pf6N2E2_5678	0.15	+1.1
6,492,260	+		Pf6N2E2_5678	0.15	+0.3
6,492,261	-		Pf6N2E2_5678	0.15	+0.9
6,492,262	+		Pf6N2E2_5678	0.15	+1.2
6,492,318	+		Pf6N2E2_5678	0.26	-2.0
6,492,318	+		Pf6N2E2_5678	0.26	+0.0
6,492,318	+		Pf6N2E2_5678	0.26	-0.6
6,492,318	+		Pf6N2E2_5678	0.26	-0.9
6,492,552	+		Pf6N2E2_5678	0.72	-0.5
6,492,648	+				-0.8
6,492,649	-				-0.8
6,492,729	-				+0.1
6,492,729	-				+1.6
6,492,854	+				+0.2
6,492,871	+		Pf6N2E2_5679	0.13	-1.2
6,492,908	+		Pf6N2E2_5679	0.39	-2.1
6,492,908	+		Pf6N2E2_5679	0.39	-1.3
6,492,908	+		Pf6N2E2_5679	0.39	-1.9
6,492,910	+		Pf6N2E2_5679	0.40	-1.0
6,492,910	+		Pf6N2E2_5679	0.40	-1.7
6,492,922	+		Pf6N2E2_5679	0.49	-0.3
6,492,929	+		Pf6N2E2_5679	0.54	-1.6
6,492,929	+		Pf6N2E2_5679	0.54	-0.5
6,492,933	+				-0.0
6,492,943	+		Pf6N2E2_5679	0.64	-1.1
6,492,943	+		Pf6N2E2_5679	0.64	-1.8
6,492,964	+		Pf6N2E2_5679	0.79	-1.6
6,493,014	+				+2.0