Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5610

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,423,953	-		Pf6N2E2_5608	0.88	+1.4
6,424,051	-				+0.6
6,424,183	+				+0.2
6,424,184	-				+0.8
6,424,214	+				+0.5
6,424,214	+				-0.7
6,424,240	+				-0.9
6,424,249	-				-0.6
6,424,273	+				-0.1
6,424,273	+				+0.7
6,424,274	-				-0.2
6,424,317	+				+1.0
6,424,318	-				+0.0
6,424,395	+		Pf6N2E2_5609	0.19	+0.0
6,424,395	+		Pf6N2E2_5609	0.19	+1.0
6,424,396	-		Pf6N2E2_5609	0.19	+1.1
6,424,396	-		Pf6N2E2_5609	0.19	+0.5
6,424,441	-		Pf6N2E2_5609	0.26	+1.4
6,424,481	+		Pf6N2E2_5609	0.32	+1.1
6,424,557	+		Pf6N2E2_5609	0.43	-1.2
6,424,557	+		Pf6N2E2_5609	0.43	+1.1
6,424,558	-		Pf6N2E2_5609	0.43	+0.8
6,424,558	-		Pf6N2E2_5609	0.43	+1.6
6,424,558	-		Pf6N2E2_5609	0.43	+2.1
6,424,558	-		Pf6N2E2_5609	0.43	+0.2
6,424,665	+		Pf6N2E2_5609	0.59	-0.2
6,424,665	+		Pf6N2E2_5609	0.59	+0.2
6,424,666	-		Pf6N2E2_5609	0.59	+1.1
6,424,666	-		Pf6N2E2_5609	0.59	+2.3
6,424,900	+				+0.2
6,424,900	+				-0.9
6,424,900	+				+0.4
6,424,900	+				+1.2
6,424,900	+				+0.9
6,424,900	+				+0.5
6,424,900	+				-0.6
6,424,900	+				-0.4
6,424,900	+				+0.5
6,424,900	+				+0.4
6,424,900	+				+1.8
6,424,900	+				-0.2
6,424,901	-				+0.8
6,424,901	-				+0.6
6,424,901	-				+0.9
6,424,901	-				+0.2
6,424,901	-				-0.2
6,424,945	-				-0.9
6,425,152	+		Pf6N2E2_5610	0.17	-0.3
6,425,152	+		Pf6N2E2_5610	0.17	-4.2
6,425,245	+		Pf6N2E2_5610	0.24	-0.7
6,425,246	-		Pf6N2E2_5610	0.24	-0.2
6,425,258	+		Pf6N2E2_5610	0.25	-2.3
6,425,281	+		Pf6N2E2_5610	0.27	-4.9
6,425,281	+		Pf6N2E2_5610	0.27	-2.3
6,425,281	+		Pf6N2E2_5610	0.27	-1.6
6,425,281	+		Pf6N2E2_5610	0.27	-0.6
6,425,281	+		Pf6N2E2_5610	0.27	+0.0
6,425,281	+		Pf6N2E2_5610	0.27	+1.8
6,425,282	-		Pf6N2E2_5610	0.27	-3.0
6,425,379	-		Pf6N2E2_5610	0.35	-3.6
6,425,491	+		Pf6N2E2_5610	0.43	-1.9
6,425,581	-		Pf6N2E2_5610	0.50	-4.0
6,425,896	+		Pf6N2E2_5610	0.75	-2.6
6,425,897	-		Pf6N2E2_5610	0.75	+0.0
6,425,897	-		Pf6N2E2_5610	0.75	-1.2
6,425,898	+		Pf6N2E2_5610	0.75	-1.8
6,425,933	+		Pf6N2E2_5610	0.78	-2.6
6,425,953	+		Pf6N2E2_5610	0.80	-2.6
6,425,953	+		Pf6N2E2_5610	0.80	-3.2
6,425,954	-		Pf6N2E2_5610	0.80	-3.2
6,426,160	-				-1.0
6,426,160	-				-1.6
6,426,160	-				+0.6
6,426,211	+				-0.6
6,426,236	+				-1.0
6,426,263	-				-0.6
6,426,293	+				-1.7
6,426,293	+				+0.0
6,426,294	-				+0.0
6,426,294	-				-0.3
6,426,327	-				-4.2
6,426,396	+		Pf6N2E2_5611	0.10	+0.0
6,426,633	-		Pf6N2E2_5611	0.46	-0.4
6,426,863	-		Pf6N2E2_5611	0.80	-1.3
6,426,891	+		Pf6N2E2_5611	0.84	-2.2
6,426,891	+		Pf6N2E2_5611	0.84	+0.3
6,426,891	+		Pf6N2E2_5611	0.84	-3.0
6,426,891	+		Pf6N2E2_5611	0.84	-1.9
6,426,891	+		Pf6N2E2_5611	0.84	-2.4
6,426,891	+		Pf6N2E2_5611	0.84	-2.3
6,426,892	-		Pf6N2E2_5611	0.84	-0.8
6,426,892	-		Pf6N2E2_5611	0.84	+1.4
6,426,892	-		Pf6N2E2_5611	0.84	-1.2
6,426,892	-		Pf6N2E2_5611	0.84	+0.9
6,426,892	-		Pf6N2E2_5611	0.84	-0.2
6,426,895	+		Pf6N2E2_5611	0.85	-1.7
6,426,896	+		Pf6N2E2_5611	0.85	-0.6
6,426,896	+		Pf6N2E2_5611	0.85	-0.5
6,426,896	+		Pf6N2E2_5611	0.85	-0.9
6,426,896	+		Pf6N2E2_5611	0.85	-1.1
6,426,897	-		Pf6N2E2_5611	0.85	-1.2
6,426,897	-		Pf6N2E2_5611	0.85	-1.2
6,426,897	-		Pf6N2E2_5611	0.85	-0.3
6,426,959	-				+0.4
6,426,959	-				-0.2
6,426,976	+				+0.0
6,426,976	+				-0.0
6,426,976	+				-0.1
6,426,976	+				-2.7
6,426,976	+				+2.1
6,426,976	+				-1.2
6,426,976	+				+0.2
6,426,976	+				-1.3
6,426,976	+				-0.2
6,426,977	-				-0.4
6,426,977	-				+1.3
6,426,977	-				-0.2
6,426,980	+				+0.3
6,426,980	+				+0.6
6,426,980	+				+0.0
6,426,995	-				+0.3
6,427,008	+				-2.9
6,427,008	+				-0.7
6,427,090	+		Pf6N2E2_5612	0.13	+0.4
6,427,090	+		Pf6N2E2_5612	0.13	-0.4
6,427,090	+		Pf6N2E2_5612	0.13	-0.1
6,427,090	+		Pf6N2E2_5612	0.13	+1.1
6,427,090	+		Pf6N2E2_5612	0.13	+0.0
6,427,090	+		Pf6N2E2_5612	0.13	-0.3
6,427,090	+		Pf6N2E2_5612	0.13	+0.8
6,427,090	+		Pf6N2E2_5612	0.13	-1.7
6,427,090	+		Pf6N2E2_5612	0.13	+0.5
6,427,090	+		Pf6N2E2_5612	0.13	-0.7
6,427,091	-		Pf6N2E2_5612	0.13	-0.3
6,427,096	-		Pf6N2E2_5612	0.13	+0.1
6,427,154	+		Pf6N2E2_5612	0.22	+0.0
6,427,154	+		Pf6N2E2_5612	0.22	+1.5
6,427,155	-		Pf6N2E2_5612	0.22	-1.7
6,427,177	+		Pf6N2E2_5612	0.25	+0.7
6,427,177	+		Pf6N2E2_5612	0.25	+3.6
6,427,177	+		Pf6N2E2_5612	0.25	-0.2
6,427,177	+		Pf6N2E2_5612	0.25	+0.7
6,427,177	+		Pf6N2E2_5612	0.25	+0.3
6,427,177	+		Pf6N2E2_5612	0.25	+0.1
6,427,177	+		Pf6N2E2_5612	0.25	-1.7
6,427,177	+		Pf6N2E2_5612	0.25	+1.0
6,427,177	+		Pf6N2E2_5612	0.25	+1.1
6,427,177	+		Pf6N2E2_5612	0.25	-0.4
6,427,178	-		Pf6N2E2_5612	0.25	-1.7
6,427,178	-		Pf6N2E2_5612	0.25	+0.1
6,427,181	+		Pf6N2E2_5612	0.25	+1.5
6,427,181	+		Pf6N2E2_5612	0.25	-1.6