Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5534
Experiment: Doxycycline hyclate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,350,876 | + | +2.4 | |||
6,350,876 | + | +0.9 | |||
6,350,877 | - | -1.5 | |||
6,350,901 | - | -3.4 | |||
6,351,202 | + | Pf6N2E2_5534 | 0.35 | -2.3 | |
6,351,202 | + | Pf6N2E2_5534 | 0.35 | -3.6 | |
6,351,202 | + | Pf6N2E2_5534 | 0.35 | -1.5 | |
6,351,202 | + | Pf6N2E2_5534 | 0.35 | -1.5 | |
6,351,203 | - | Pf6N2E2_5534 | 0.35 | -4.5 | |
6,351,203 | - | Pf6N2E2_5534 | 0.35 | -3.4 | |
6,351,268 | - | Pf6N2E2_5534 | 0.43 | -4.5 | |
6,351,484 | + | Pf6N2E2_5534 | 0.72 | -1.7 | |
6,351,484 | + | Pf6N2E2_5534 | 0.72 | -2.8 | |
6,351,484 | + | Pf6N2E2_5534 | 0.72 | -3.4 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -2.8 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -2.8 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -1.5 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -2.8 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -2.5 | |
6,351,485 | - | Pf6N2E2_5534 | 0.72 | -2.3 | |
6,351,847 | - | -1.3 | |||
6,351,855 | + | -0.5 | |||
6,351,872 | - | -0.9 | |||
6,351,879 | + | +0.1 | |||
6,352,572 | - | Pf6N2E2_5536 | 0.10 | -0.4 |
Or see this region's nucleotide sequence