Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5491

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,309,298	-				+1.2
6,309,298	-				-0.1
6,309,342	+		Pf6N2E2_5490	0.20	-0.9
6,309,343	-		Pf6N2E2_5490	0.21	+0.6
6,309,343	-		Pf6N2E2_5490	0.21	-0.3
6,309,343	-		Pf6N2E2_5490	0.21	+0.8
6,309,343	-		Pf6N2E2_5490	0.21	-0.8
6,309,343	-		Pf6N2E2_5490	0.21	+1.4
6,309,343	-		Pf6N2E2_5490	0.21	-2.2
6,309,343	-		Pf6N2E2_5490	0.21	-1.8
6,309,345	-		Pf6N2E2_5490	0.22	+0.6
6,309,345	-		Pf6N2E2_5490	0.22	-1.4
6,309,391	-		Pf6N2E2_5490	0.45	+0.2
6,309,391	-		Pf6N2E2_5490	0.45	+0.3
6,309,391	-		Pf6N2E2_5490	0.45	+0.9
6,309,391	-		Pf6N2E2_5490	0.45	-0.6
6,309,391	-		Pf6N2E2_5490	0.45	+0.3
6,309,391	-		Pf6N2E2_5490	0.45	+0.1
6,309,391	-		Pf6N2E2_5490	0.45	-0.6
6,309,391	-		Pf6N2E2_5490	0.45	+1.2
6,309,391	-		Pf6N2E2_5490	0.45	+0.7
6,309,661	-				+1.0
6,309,671	-				+0.3
6,309,671	-				+1.8
6,309,695	-				+0.6
6,309,695	-				+1.7
6,309,695	-				+1.2
6,309,695	-				+0.6
6,309,747	-				+1.7
6,309,798	+				+1.3
6,309,798	+				-0.3
6,309,799	-				+1.4
6,309,799	-				+0.2
6,309,817	+				+1.7
6,309,817	+				+0.7
6,309,846	+				+0.1
6,309,846	+				+2.0
6,309,846	+				+0.9
6,309,846	+				+0.1
6,309,846	+				+1.3
6,309,847	-				+0.7
6,309,847	-				+1.6
6,309,847	-				+1.5
6,309,847	-				+1.3
6,309,847	-				+1.1
6,310,050	+		Pf6N2E2_5491	0.28	+0.8
6,310,050	+		Pf6N2E2_5491	0.28	+1.1
6,310,050	+		Pf6N2E2_5491	0.28	+1.9
6,310,050	+		Pf6N2E2_5491	0.28	+2.2
6,310,050	+		Pf6N2E2_5491	0.28	+0.3
6,310,050	+		Pf6N2E2_5491	0.28	-2.0
6,310,050	+		Pf6N2E2_5491	0.28	+1.5
6,310,051	-		Pf6N2E2_5491	0.28	+1.2
6,310,051	-		Pf6N2E2_5491	0.28	+2.0
6,310,051	-		Pf6N2E2_5491	0.28	+1.9
6,310,054	+		Pf6N2E2_5491	0.29	+0.5
6,310,054	+		Pf6N2E2_5491	0.29	+2.0
6,310,055	-		Pf6N2E2_5491	0.29	+0.8
6,310,055	-		Pf6N2E2_5491	0.29	+1.0
6,310,055	-		Pf6N2E2_5491	0.29	-0.9
6,310,139	+		Pf6N2E2_5491	0.36	-0.0
6,310,140	-		Pf6N2E2_5491	0.36	+1.9
6,310,142	+		Pf6N2E2_5491	0.36	+0.6
6,310,142	+		Pf6N2E2_5491	0.36	+2.1
6,310,142	+		Pf6N2E2_5491	0.36	+2.8
6,310,143	-		Pf6N2E2_5491	0.37	+1.0
6,310,143	-		Pf6N2E2_5491	0.37	+2.3
6,310,158	+		Pf6N2E2_5491	0.38	+1.0
6,310,159	-		Pf6N2E2_5491	0.38	+0.9
6,310,249	-		Pf6N2E2_5491	0.46	+2.2
6,310,249	-		Pf6N2E2_5491	0.46	+0.6
6,310,249	-		Pf6N2E2_5491	0.46	+0.8
6,310,258	+		Pf6N2E2_5491	0.47	-0.0
6,310,258	+		Pf6N2E2_5491	0.47	+0.1
6,310,258	+		Pf6N2E2_5491	0.47	-0.2
6,310,259	-		Pf6N2E2_5491	0.47	+1.4
6,310,259	-		Pf6N2E2_5491	0.47	-0.6
6,310,259	-		Pf6N2E2_5491	0.47	+4.2
6,310,567	+		Pf6N2E2_5491	0.75	+1.0
6,310,567	+		Pf6N2E2_5491	0.75	+0.7
6,310,567	+		Pf6N2E2_5491	0.75	+0.8
6,310,567	+		Pf6N2E2_5491	0.75	+1.9
6,310,568	-		Pf6N2E2_5491	0.75	+1.1
6,310,568	-		Pf6N2E2_5491	0.75	+0.3
6,310,568	-		Pf6N2E2_5491	0.75	+1.5
6,310,568	-		Pf6N2E2_5491	0.75	-1.2
6,310,578	+		Pf6N2E2_5491	0.76	+0.6
6,310,888	-				+1.4
6,310,930	+				+0.9
6,310,930	+				+0.6
6,311,389	+		Pf6N2E2_5492	0.59	+0.7
6,311,389	+		Pf6N2E2_5492	0.59	-0.8
6,311,389	+		Pf6N2E2_5492	0.59	-0.8
6,311,390	-		Pf6N2E2_5492	0.59	+1.8
6,311,390	-		Pf6N2E2_5492	0.59	+0.9
6,311,509	-		Pf6N2E2_5492	0.72	+0.8
6,311,666	+		Pf6N2E2_5492	0.89	+1.3
6,311,666	+		Pf6N2E2_5492	0.89	+0.9
6,311,666	+		Pf6N2E2_5492	0.89	-0.8
6,311,666	+		Pf6N2E2_5492	0.89	-1.5
6,311,667	-		Pf6N2E2_5492	0.89	+0.9
6,311,713	+				-0.5
6,311,713	+				+0.1
6,311,714	-				+0.4
6,311,714	-				+1.4