Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5364

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
6,161,380	+				+1.7
6,161,380	+				-0.4
6,161,384	+				+1.4
6,161,384	+				+0.1
6,161,384	+				+1.8
6,161,384	+				-0.9
6,161,384	+				+1.1
6,161,384	+				-0.7
6,161,384	+				+1.1
6,161,384	+				-0.9
6,161,384	+				+0.1
6,161,384	+				+1.0
6,161,384	+				-1.4
6,161,384	+				+0.1
6,161,384	+				-0.2
6,161,405	+				-0.4
6,161,405	+				-0.5
6,161,433	-				-2.4
6,161,433	-				-1.3
6,161,454	-				+0.4
6,161,549	-				-0.9
6,161,593	+				+0.1
6,161,593	+				+0.1
6,161,687	+		Pf6N2E2_5364	0.12	+0.8
6,161,688	-		Pf6N2E2_5364	0.12	+0.8
6,162,048	+		Pf6N2E2_5364	0.37	+1.7
6,162,059	+		Pf6N2E2_5364	0.37	-0.0
6,162,060	-		Pf6N2E2_5364	0.37	-0.7
6,162,060	-		Pf6N2E2_5364	0.37	-0.5
6,162,145	+		Pf6N2E2_5364	0.43	-1.3
6,162,146	-		Pf6N2E2_5364	0.43	-2.6
6,162,146	-		Pf6N2E2_5364	0.43	-0.9
6,162,199	+		Pf6N2E2_5364	0.47	-1.4
6,162,199	+		Pf6N2E2_5364	0.47	+0.7
6,162,200	-		Pf6N2E2_5364	0.47	-1.0
6,162,249	-		Pf6N2E2_5364	0.50	-0.2
6,162,267	+		Pf6N2E2_5364	0.51	+0.8
6,162,267	+		Pf6N2E2_5364	0.51	-0.1
6,162,267	+		Pf6N2E2_5364	0.51	-0.1
6,162,409	+		Pf6N2E2_5364	0.61	+0.3
6,162,409	+		Pf6N2E2_5364	0.61	+1.1
6,162,410	-		Pf6N2E2_5364	0.61	-1.1
6,162,410	-		Pf6N2E2_5364	0.61	-1.2
6,162,410	-		Pf6N2E2_5364	0.61	+1.1
6,162,473	-		Pf6N2E2_5364	0.65	-0.2
6,162,586	+		Pf6N2E2_5364	0.73	-0.7
6,162,586	+		Pf6N2E2_5364	0.73	-0.9
6,162,586	+		Pf6N2E2_5364	0.73	-0.2
6,162,586	+		Pf6N2E2_5364	0.73	+0.1
6,162,587	-		Pf6N2E2_5364	0.73	+0.6
6,162,587	-		Pf6N2E2_5364	0.73	-2.2
6,162,587	-		Pf6N2E2_5364	0.73	-0.9
6,162,627	+		Pf6N2E2_5364	0.75	-0.0
6,162,627	+		Pf6N2E2_5364	0.75	-0.6
6,162,628	-		Pf6N2E2_5364	0.75	-2.4
6,162,628	-		Pf6N2E2_5364	0.75	-4.3
6,162,667	+		Pf6N2E2_5364	0.78	+0.4
6,162,667	+		Pf6N2E2_5364	0.78	+0.6
6,162,778	+		Pf6N2E2_5364	0.85	+0.3
6,162,778	+		Pf6N2E2_5364	0.85	-1.1
6,162,936	+				-0.9
6,163,127	-				-1.4
6,163,127	-				-0.1
6,163,506	-		Pf6N2E2_5365	0.20	-1.3
6,163,776	+		Pf6N2E2_5365	0.40	+0.4
6,163,776	+		Pf6N2E2_5365	0.40	+0.1
6,163,776	+		Pf6N2E2_5365	0.40	-0.2
6,163,776	+		Pf6N2E2_5365	0.40	+0.1
6,163,776	+		Pf6N2E2_5365	0.40	+1.0
6,163,776	+		Pf6N2E2_5365	0.40	+0.0
6,163,777	-		Pf6N2E2_5365	0.40	-1.9
6,163,777	-		Pf6N2E2_5365	0.40	-0.7
6,163,890	+		Pf6N2E2_5365	0.49	+0.2
6,163,890	+		Pf6N2E2_5365	0.49	-0.9
6,163,890	+		Pf6N2E2_5365	0.49	+1.1