Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5183

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,975,627	+		Pf6N2E2_5181	0.63	-3.9
5,975,628	-		Pf6N2E2_5181	0.63	-1.3
5,975,631	+		Pf6N2E2_5181	0.64	-3.8
5,975,631	+		Pf6N2E2_5181	0.64	-2.6
5,975,632	-		Pf6N2E2_5181	0.64	-0.8
5,975,632	-		Pf6N2E2_5181	0.64	-1.2
5,975,647	-		Pf6N2E2_5181	0.66	-0.2
5,975,656	-		Pf6N2E2_5181	0.67	-2.6
5,975,665	+		Pf6N2E2_5181	0.69	-4.3
5,975,665	+		Pf6N2E2_5181	0.69	-1.1
5,975,666	-		Pf6N2E2_5181	0.69	-1.9
5,975,692	-		Pf6N2E2_5181	0.73	-3.4
5,975,749	+		Pf6N2E2_5181	0.82	-2.1
5,975,749	+		Pf6N2E2_5181	0.82	-2.6
5,975,750	-		Pf6N2E2_5181	0.82	-3.5
5,976,028	+		Pf6N2E2_5182	0.27	-3.4
5,976,029	-		Pf6N2E2_5182	0.28	-2.1
5,976,029	-		Pf6N2E2_5182	0.28	-2.0
5,976,029	-		Pf6N2E2_5182	0.28	-3.8
5,976,029	-		Pf6N2E2_5182	0.28	-3.0
5,976,031	-		Pf6N2E2_5182	0.28	-2.8
5,976,060	+		Pf6N2E2_5182	0.33	-2.4
5,976,061	-		Pf6N2E2_5182	0.33	-1.8
5,976,234	+		Pf6N2E2_5182	0.60	-0.3
5,976,234	+		Pf6N2E2_5182	0.60	+1.1
5,976,234	+		Pf6N2E2_5182	0.60	-1.7
5,976,234	+		Pf6N2E2_5182	0.60	-2.5
5,976,234	+		Pf6N2E2_5182	0.60	-3.6
5,976,235	-		Pf6N2E2_5182	0.61	-2.7
5,976,258	+		Pf6N2E2_5182	0.64	-3.2
5,976,258	+		Pf6N2E2_5182	0.64	-3.2
5,976,258	+		Pf6N2E2_5182	0.64	-1.8
5,976,258	+		Pf6N2E2_5182	0.64	-2.2
5,976,258	+		Pf6N2E2_5182	0.64	-1.8
5,976,259	-		Pf6N2E2_5182	0.64	-1.0
5,976,259	-		Pf6N2E2_5182	0.64	-3.0
5,976,259	-		Pf6N2E2_5182	0.64	-2.6
5,976,259	-		Pf6N2E2_5182	0.64	-3.0
5,976,259	-		Pf6N2E2_5182	0.64	-3.7
5,976,259	-		Pf6N2E2_5182	0.64	-1.4
5,976,259	-		Pf6N2E2_5182	0.64	-0.5
5,976,259	-		Pf6N2E2_5182	0.64	-3.5
5,976,259	-		Pf6N2E2_5182	0.64	-2.2
5,976,259	-		Pf6N2E2_5182	0.64	-2.6
5,976,262	+		Pf6N2E2_5182	0.65	-4.5
5,976,262	+		Pf6N2E2_5182	0.65	-1.5
5,976,263	-		Pf6N2E2_5182	0.65	-1.5
5,976,582	-				-0.8
5,976,582	-				-2.2
5,976,659	+				-2.0
5,976,765	-		Pf6N2E2_5183	0.13	-1.8
5,976,765	-		Pf6N2E2_5183	0.13	-3.5
5,976,765	-		Pf6N2E2_5183	0.13	-3.9
5,976,851	-		Pf6N2E2_5183	0.17	-2.4
5,976,854	+		Pf6N2E2_5183	0.17	-3.9
5,976,854	+		Pf6N2E2_5183	0.17	-3.2
5,976,854	+		Pf6N2E2_5183	0.17	-4.0
5,976,854	+		Pf6N2E2_5183	0.17	-1.4
5,976,854	+		Pf6N2E2_5183	0.17	-2.3
5,976,854	+		Pf6N2E2_5183	0.17	-2.0
5,976,854	+		Pf6N2E2_5183	0.17	-2.6
5,976,854	+		Pf6N2E2_5183	0.17	-0.8
5,976,854	+		Pf6N2E2_5183	0.17	-1.5
5,976,854	+		Pf6N2E2_5183	0.17	-1.1
5,976,854	+		Pf6N2E2_5183	0.17	-1.6
5,976,854	+		Pf6N2E2_5183	0.17	-2.2
5,976,854	+		Pf6N2E2_5183	0.17	+0.2
5,976,854	+		Pf6N2E2_5183	0.17	-2.2
5,976,854	+		Pf6N2E2_5183	0.17	-1.7
5,976,855	-		Pf6N2E2_5183	0.17	-2.8
5,976,855	-		Pf6N2E2_5183	0.17	-2.5
5,976,855	-		Pf6N2E2_5183	0.17	-1.2
5,976,855	-		Pf6N2E2_5183	0.17	-2.9
5,976,855	-		Pf6N2E2_5183	0.17	-2.0
5,976,855	-		Pf6N2E2_5183	0.17	-2.1
5,976,855	-		Pf6N2E2_5183	0.17	-2.1
5,976,855	-		Pf6N2E2_5183	0.17	-4.0
5,976,855	-		Pf6N2E2_5183	0.17	-2.8
5,976,855	-		Pf6N2E2_5183	0.17	-2.6
5,976,855	-		Pf6N2E2_5183	0.17	-3.4
5,976,855	-		Pf6N2E2_5183	0.17	-1.1
5,976,855	-		Pf6N2E2_5183	0.17	-2.9
5,977,004	+		Pf6N2E2_5183	0.23	-1.5
5,977,038	-		Pf6N2E2_5183	0.25	-3.0
5,977,094	+		Pf6N2E2_5183	0.27	-2.3
5,977,284	-		Pf6N2E2_5183	0.35	-3.0
5,977,284	-		Pf6N2E2_5183	0.35	-2.1
5,977,376	+		Pf6N2E2_5183	0.39	-3.1
5,977,376	+		Pf6N2E2_5183	0.39	-2.6
5,977,376	+		Pf6N2E2_5183	0.39	-4.0
5,977,376	+		Pf6N2E2_5183	0.39	-0.6
5,977,377	-		Pf6N2E2_5183	0.39	-2.6
5,977,377	-		Pf6N2E2_5183	0.39	-1.4
5,977,377	-		Pf6N2E2_5183	0.39	-1.4
5,977,377	-		Pf6N2E2_5183	0.39	-3.2
5,977,476	-		Pf6N2E2_5183	0.44	-4.1
5,977,476	-		Pf6N2E2_5183	0.44	-3.8
5,977,565	+		Pf6N2E2_5183	0.48	-3.2
5,977,565	+		Pf6N2E2_5183	0.48	-1.6
5,977,565	+		Pf6N2E2_5183	0.48	-4.1
5,977,565	+		Pf6N2E2_5183	0.48	-3.5
5,977,565	+		Pf6N2E2_5183	0.48	-2.5
5,977,566	-		Pf6N2E2_5183	0.48	-2.5
5,977,566	-		Pf6N2E2_5183	0.48	-1.1
5,977,754	+		Pf6N2E2_5183	0.56	-3.2
5,977,754	+		Pf6N2E2_5183	0.56	-2.2
5,977,755	-		Pf6N2E2_5183	0.56	-1.5
5,977,755	-		Pf6N2E2_5183	0.56	-3.7
5,977,755	-		Pf6N2E2_5183	0.56	-0.8
5,977,755	-		Pf6N2E2_5183	0.56	-3.0
5,977,811	+		Pf6N2E2_5183	0.58	-3.1
5,977,811	+		Pf6N2E2_5183	0.58	-2.1
5,977,811	+		Pf6N2E2_5183	0.58	-2.6
5,977,859	-		Pf6N2E2_5183	0.60	-2.4
5,977,979	-		Pf6N2E2_5183	0.65	-3.0
5,977,979	-		Pf6N2E2_5183	0.65	-2.4
5,978,077	+		Pf6N2E2_5183	0.70	-1.0
5,978,077	+		Pf6N2E2_5183	0.70	-1.5
5,978,078	-		Pf6N2E2_5183	0.70	-2.6
5,978,168	-		Pf6N2E2_5183	0.74	-2.2
5,978,280	-		Pf6N2E2_5183	0.79	-2.8
5,978,280	-		Pf6N2E2_5183	0.79	-4.3
5,978,280	-		Pf6N2E2_5183	0.79	-2.0
5,978,435	+		Pf6N2E2_5183	0.85	-2.1
5,978,435	+		Pf6N2E2_5183	0.85	-1.0
5,978,436	-		Pf6N2E2_5183	0.85	-3.6
5,978,446	+		Pf6N2E2_5183	0.86	-1.6
5,978,447	-		Pf6N2E2_5183	0.86	-2.7
5,978,526	-		Pf6N2E2_5183	0.89	-1.0
5,978,526	-		Pf6N2E2_5183	0.89	-2.6
5,978,563	+				-1.8
5,978,564	-				-3.0
5,978,564	-				-2.6
5,978,722	+				-2.4
5,978,774	+				-1.5
5,978,774	+				-0.5
5,978,774	+				-0.6
5,978,774	+				-0.3
5,978,774	+				-2.4
5,978,774	+				-0.2
5,978,774	+				-0.9
5,978,774	+				-0.2
5,978,774	+				+1.3
5,978,774	+				-1.0
5,978,774	+				-1.4
5,978,775	-				-1.7
5,978,775	-				-0.2
5,978,775	-				+0.1
5,978,775	-				-1.0
5,978,780	+				-0.5
5,978,780	+				-0.1
5,978,781	-				-0.8
5,978,781	-				-0.5
5,978,781	-				+0.0
5,978,781	-				+0.2
5,978,781	-				-1.3
5,978,790	+				-0.8
5,978,839	+				+1.6
5,978,893	+				-0.3
5,978,893	+				-0.4
5,978,893	+				-1.4
5,978,893	+				-0.5
5,978,893	+				+0.7
5,978,893	+				+1.0
5,978,894	-				+1.2
5,978,894	-				+0.1
5,978,894	-				-1.1
5,978,894	-				-0.2
5,978,897	+				-1.6
5,978,897	+				+2.1
5,978,897	+				+0.7
5,978,897	+				-4.5
5,978,897	+				-0.8
5,978,897	+				-0.8
5,978,897	+				-0.2
5,978,897	+				-1.4
5,978,897	+				+0.7
5,978,897	+				+0.3
5,978,897	+				-0.2
5,978,897	+				+0.4
5,978,897	+				-0.8
5,978,897	+				-0.4
5,978,897	+				+0.2
5,978,898	-				-1.9
5,978,898	-				-1.0
5,978,898	-				+0.1
5,978,898	-				-1.8
5,978,898	-				-0.3
5,978,898	-				-0.2
5,978,898	-				-0.3
5,978,898	-				-0.8
5,978,898	-				-0.4
5,978,900	+				-0.1
5,978,901	-				+0.4
5,978,926	+				+0.8
5,978,926	+				-0.2
5,978,927	-				-1.7
5,978,927	-				-1.4
5,979,033	+				+1.5
5,979,034	-				+0.6
5,979,034	-				-0.5
5,979,034	-				-0.5
5,979,034	-				+0.6
5,979,034	-				+0.9
5,979,053	+				-0.9
5,979,053	+				+1.0
5,979,053	+				+0.5
5,979,054	-				+1.0
5,979,054	-				+0.2
5,979,054	-				+0.7
5,979,054	-				+0.1
5,979,054	-				-2.2
5,979,054	-				-0.2
5,979,054	-				+0.5
5,979,057	+				-0.4
5,979,057	+				+0.7
5,979,057	+				+0.6
5,979,057	+				+1.0
5,979,057	+				+0.8
5,979,057	+				-0.5
5,979,057	+				+1.2
5,979,057	+				-0.8
5,979,058	-				+0.6
5,979,058	-				-0.0
5,979,058	-				+2.1
5,979,058	-				-0.1
5,979,216	+				+0.3
5,979,217	-				+0.6
5,979,217	-				-0.1
5,979,217	-				-0.0
5,979,219	+				+0.9
5,979,220	-				+1.7
5,979,273	+		Pf6N2E2_5184	0.11	-0.8
5,979,273	+		Pf6N2E2_5184	0.11	-0.4
5,979,273	+		Pf6N2E2_5184	0.11	+1.2
5,979,273	+		Pf6N2E2_5184	0.11	+0.8
5,979,273	+		Pf6N2E2_5184	0.11	-0.3
5,979,273	+		Pf6N2E2_5184	0.11	-0.4
5,979,273	+		Pf6N2E2_5184	0.11	-0.4
5,979,273	+		Pf6N2E2_5184	0.11	+0.8
5,979,273	+		Pf6N2E2_5184	0.11	+1.3
5,979,273	+		Pf6N2E2_5184	0.11	-0.1
5,979,273	+		Pf6N2E2_5184	0.11	+0.0
5,979,273	+		Pf6N2E2_5184	0.11	+2.9
5,979,273	+		Pf6N2E2_5184	0.11	+0.9
5,979,274	-		Pf6N2E2_5184	0.11	+0.4
5,979,274	-		Pf6N2E2_5184	0.11	-0.3
5,979,274	-		Pf6N2E2_5184	0.11	-0.1
5,979,274	-		Pf6N2E2_5184	0.11	-0.4
5,979,274	-		Pf6N2E2_5184	0.11	+0.7
5,979,274	-		Pf6N2E2_5184	0.11	-2.0
5,979,274	-		Pf6N2E2_5184	0.11	+0.4
5,979,274	-		Pf6N2E2_5184	0.11	+0.2
5,979,442	-		Pf6N2E2_5184	0.17	+0.4
5,979,523	-		Pf6N2E2_5184	0.20	+1.9
5,979,670	-		Pf6N2E2_5184	0.25	-0.2
5,979,766	-		Pf6N2E2_5184	0.28	-1.2