Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4654

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,383,203	-				+0.6
5,383,209	-				+1.6
5,383,209	-				+0.6
5,383,209	-				+0.5
5,383,213	-				+2.3
5,383,213	-				-0.8
5,383,213	-				+2.4
5,383,213	-				+0.4
5,383,213	-				+0.6
5,383,213	-				+0.8
5,383,332	-		Pf6N2E2_4653	0.20	+0.9
5,383,332	-		Pf6N2E2_4653	0.20	+1.2
5,383,332	-		Pf6N2E2_4653	0.20	+0.6
5,383,332	-		Pf6N2E2_4653	0.20	+0.3
5,383,332	-		Pf6N2E2_4653	0.20	+1.3
5,383,332	-		Pf6N2E2_4653	0.20	+0.8
5,383,431	-		Pf6N2E2_4653	0.30	+1.0
5,383,431	-		Pf6N2E2_4653	0.30	+1.0
5,383,493	-		Pf6N2E2_4653	0.36	+1.4
5,383,650	-		Pf6N2E2_4653	0.52	+0.9
5,383,650	-		Pf6N2E2_4653	0.52	+1.3
5,383,650	-		Pf6N2E2_4653	0.52	+0.7
5,383,650	-		Pf6N2E2_4653	0.52	-0.0
5,383,650	-		Pf6N2E2_4653	0.52	-0.4
5,383,779	-		Pf6N2E2_4653	0.65	+0.7
5,383,779	-		Pf6N2E2_4653	0.65	+0.9
5,383,779	-		Pf6N2E2_4653	0.65	+1.2
5,384,040	-				+3.8
5,384,040	-				+3.7
5,384,040	-				+3.9
5,384,124	-				+4.0
5,384,124	-				+4.9
5,384,132	-				+2.4
5,384,152	-				+2.1
5,384,165	-				+1.3
5,384,165	-				+2.0
5,384,165	-				+2.6
5,384,222	-		Pf6N2E2_4654	0.27	+3.5
5,384,252	+		Pf6N2E2_4654	0.40	+1.7
5,384,252	+		Pf6N2E2_4654	0.40	+0.3
5,384,253	-		Pf6N2E2_4654	0.41	+2.6
5,384,253	-		Pf6N2E2_4654	0.41	+4.7
5,384,253	-		Pf6N2E2_4654	0.41	+4.7
5,384,253	-		Pf6N2E2_4654	0.41	+3.4
5,384,253	-		Pf6N2E2_4654	0.41	+3.9
5,384,253	-		Pf6N2E2_4654	0.41	+3.5
5,384,253	-		Pf6N2E2_4654	0.41	+4.9
5,384,253	-		Pf6N2E2_4654	0.41	+4.0
5,384,295	+		Pf6N2E2_4654	0.59	+0.4
5,384,295	+		Pf6N2E2_4654	0.59	-0.9
5,384,295	+		Pf6N2E2_4654	0.59	+0.0
5,384,295	+		Pf6N2E2_4654	0.59	-1.0
5,384,296	-		Pf6N2E2_4654	0.60	+5.4
5,384,296	-		Pf6N2E2_4654	0.60	+5.1
5,384,296	-		Pf6N2E2_4654	0.60	+6.0
5,384,324	+		Pf6N2E2_4654	0.73	-0.2
5,384,324	+		Pf6N2E2_4654	0.73	-0.3
5,384,324	+		Pf6N2E2_4654	0.73	-0.2
5,384,325	-		Pf6N2E2_4654	0.73	+5.1
5,384,325	-		Pf6N2E2_4654	0.73	+1.9
5,384,387	+				+1.5