Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4579

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,308,521	+				+0.4
5,308,521	+				-0.5
5,308,521	+				+0.2
5,308,524	+				-0.3
5,308,524	+				-0.0
5,308,604	+		Pf6N2E2_4578	0.13	-0.2
5,308,719	+		Pf6N2E2_4578	0.25	+0.2
5,308,723	-		Pf6N2E2_4578	0.25	-0.4
5,308,878	+		Pf6N2E2_4578	0.41	+0.8
5,308,878	+		Pf6N2E2_4578	0.41	+0.0
5,308,878	+		Pf6N2E2_4578	0.41	+0.4
5,308,878	+		Pf6N2E2_4578	0.41	+0.6
5,308,879	-		Pf6N2E2_4578	0.41	+0.2
5,308,879	-		Pf6N2E2_4578	0.41	-0.9
5,308,879	-		Pf6N2E2_4578	0.41	+0.0
5,308,879	-		Pf6N2E2_4578	0.41	-1.0
5,308,879	-		Pf6N2E2_4578	0.41	-0.2
5,308,879	-		Pf6N2E2_4578	0.41	-0.8
5,308,879	-		Pf6N2E2_4578	0.41	-1.6
5,308,879	-		Pf6N2E2_4578	0.41	-0.9
5,308,879	-		Pf6N2E2_4578	0.41	-0.2
5,308,879	-		Pf6N2E2_4578	0.41	+0.3
5,308,879	-		Pf6N2E2_4578	0.41	-0.0
5,308,911	+		Pf6N2E2_4578	0.44	-1.5
5,308,912	-		Pf6N2E2_4578	0.44	-0.3
5,309,139	+		Pf6N2E2_4578	0.67	+0.9
5,309,140	-		Pf6N2E2_4578	0.67	-0.6
5,309,140	-		Pf6N2E2_4578	0.67	+0.4
5,309,241	+		Pf6N2E2_4578	0.77	-0.4
5,309,241	+		Pf6N2E2_4578	0.77	-0.2
5,309,241	+		Pf6N2E2_4578	0.77	-0.2
5,309,242	-		Pf6N2E2_4578	0.77	-0.6
5,309,474	+				-0.1
5,309,474	+				+0.7
5,309,474	+				+0.8
5,309,474	+				+0.6
5,309,474	+				-0.1
5,309,475	-				+0.3
5,309,475	-				+0.4
5,309,475	-				+0.4
5,309,540	-				-1.3
5,309,540	-				+0.4
5,309,540	-				+0.2
5,309,542	+				-0.3
5,309,542	+				+0.9
5,309,543	-				-2.1
5,309,543	-				-1.7
5,309,543	-				-3.0
5,309,626	+		Pf6N2E2_4579	0.20	-0.7
5,309,626	+		Pf6N2E2_4579	0.20	-1.1
5,309,627	-		Pf6N2E2_4579	0.20	-0.1
5,309,945	-		Pf6N2E2_4579	0.72	-1.0
5,310,053	+				-2.1
5,310,074	+				+0.4
5,310,115	-				+1.1
5,310,115	-				-2.5
5,310,297	+		Pf6N2E2_4580	0.12	-0.8
5,310,298	-		Pf6N2E2_4580	0.12	+0.1
5,310,315	+		Pf6N2E2_4580	0.14	+0.3
5,310,315	+		Pf6N2E2_4580	0.14	-0.4
5,310,315	+		Pf6N2E2_4580	0.14	-0.6
5,310,315	+		Pf6N2E2_4580	0.14	-2.0
5,310,316	-		Pf6N2E2_4580	0.14	+0.4
5,310,316	-		Pf6N2E2_4580	0.14	-1.1
5,310,316	-		Pf6N2E2_4580	0.14	-0.1
5,310,438	+		Pf6N2E2_4580	0.22	-0.8
5,310,439	-		Pf6N2E2_4580	0.22	+0.1
5,310,472	+		Pf6N2E2_4580	0.24	-0.0
5,310,473	-		Pf6N2E2_4580	0.24	-0.3
5,310,473	-		Pf6N2E2_4580	0.24	-1.2
5,310,473	-		Pf6N2E2_4580	0.24	-0.5
5,310,538	+		Pf6N2E2_4580	0.29	-0.1
5,310,539	-		Pf6N2E2_4580	0.29	-1.4
5,310,550	-		Pf6N2E2_4580	0.29	-0.2
5,310,550	-		Pf6N2E2_4580	0.29	-1.3
5,310,550	-		Pf6N2E2_4580	0.29	-0.1
5,310,550	-		Pf6N2E2_4580	0.29	+0.2
5,310,558	+		Pf6N2E2_4580	0.30	-1.3
5,310,651	+		Pf6N2E2_4580	0.36	-0.7
5,310,954	+		Pf6N2E2_4580	0.56	+0.2
5,310,954	+		Pf6N2E2_4580	0.56	-0.2
5,310,954	+		Pf6N2E2_4580	0.56	-2.7
5,310,954	+		Pf6N2E2_4580	0.56	-2.9
5,310,954	+		Pf6N2E2_4580	0.56	-2.4
5,310,955	-		Pf6N2E2_4580	0.56	+0.4
5,310,970	-		Pf6N2E2_4580	0.57	-0.8