Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4333

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,054,503	+				-2.0
5,054,586	+		Pf6N2E2_4331	0.23	+0.8
5,054,587	-		Pf6N2E2_4331	0.24	+1.0
5,054,657	+		Pf6N2E2_4331	0.39	+0.4
5,054,657	+		Pf6N2E2_4331	0.39	-0.2
5,054,657	+		Pf6N2E2_4331	0.39	+0.6
5,054,658	-		Pf6N2E2_4331	0.39	-0.6
5,054,907	+				-0.0
5,054,907	+				-0.3
5,054,908	-				+1.6
5,054,908	-				+1.1
5,054,908	-				+0.2
5,054,930	+				+0.8
5,054,930	+				+1.7
5,054,930	+				+0.1
5,054,931	-				+0.7
5,054,931	-				+0.8
5,054,931	-				-0.2
5,055,219	+		Pf6N2E2_4332	0.64	+1.2
5,055,219	+		Pf6N2E2_4332	0.64	-0.0
5,055,220	-		Pf6N2E2_4332	0.64	+0.7
5,055,220	-		Pf6N2E2_4332	0.64	+1.0
5,055,253	+		Pf6N2E2_4332	0.71	+0.8
5,055,253	+		Pf6N2E2_4332	0.71	+0.7
5,055,254	-		Pf6N2E2_4332	0.72	+0.2
5,055,325	-		Pf6N2E2_4332	0.87	+1.0
5,055,345	+				-0.1
5,055,345	+				-0.1
5,055,345	+				+0.7
5,055,345	+				+0.1
5,055,346	-				+0.6
5,055,391	+				+1.2
5,055,391	+				+0.1
5,055,391	+				+0.2
5,055,392	-				-0.1
5,055,392	-				+0.9
5,055,465	+				+0.1
5,055,465	+				+0.7
5,055,466	-				+0.5
5,055,631	+		Pf6N2E2_4333	0.34	+0.4
5,055,631	+		Pf6N2E2_4333	0.34	+0.3
5,055,632	-		Pf6N2E2_4333	0.34	+0.1
5,055,663	+		Pf6N2E2_4333	0.41	-0.4
5,055,663	+		Pf6N2E2_4333	0.41	+1.8
5,055,663	+		Pf6N2E2_4333	0.41	-0.2
5,055,664	-		Pf6N2E2_4333	0.41	+0.5
5,055,664	-		Pf6N2E2_4333	0.41	+1.7
5,055,771	+		Pf6N2E2_4333	0.63	+0.6
5,055,771	+		Pf6N2E2_4333	0.63	+0.4
5,055,771	+		Pf6N2E2_4333	0.63	+0.6
5,055,772	-		Pf6N2E2_4333	0.63	+1.4
5,055,772	-		Pf6N2E2_4333	0.63	+1.3
5,055,772	-		Pf6N2E2_4333	0.63	+0.4
5,055,772	-		Pf6N2E2_4333	0.63	+0.5
5,055,772	-		Pf6N2E2_4333	0.63	-0.1
5,055,772	-		Pf6N2E2_4333	0.63	+0.5
5,055,772	-		Pf6N2E2_4333	0.63	-0.2
5,055,940	+				-0.2
5,055,975	-				+0.6
5,056,175	-				+0.3
5,056,240	+				-0.1
5,056,240	+				-0.1
5,056,240	+				+0.6
5,056,240	+				+0.5
5,056,241	-				+1.6
5,056,255	+				-1.0
5,056,270	+				-0.8
5,056,270	+				+0.3
5,056,270	+				+0.1
5,056,270	+				+0.1
5,056,271	-				-0.1
5,056,271	-				+0.4
5,056,271	-				+1.1
5,056,273	+				+0.6
5,056,375	+		Pf6N2E2_4334	0.13	+0.6
5,056,376	-		Pf6N2E2_4334	0.14	+0.2
5,056,376	-		Pf6N2E2_4334	0.14	-0.4
5,056,376	-		Pf6N2E2_4334	0.14	-0.7
5,056,376	-		Pf6N2E2_4334	0.14	+0.6
5,056,462	+		Pf6N2E2_4334	0.19	-0.4
5,056,462	+		Pf6N2E2_4334	0.19	+0.5
5,056,492	+		Pf6N2E2_4334	0.21	+1.3
5,056,492	+		Pf6N2E2_4334	0.21	+0.9
5,056,492	+		Pf6N2E2_4334	0.21	-0.2
5,056,493	-		Pf6N2E2_4334	0.21	+1.1
5,056,544	-		Pf6N2E2_4334	0.25	-0.1
5,056,819	+		Pf6N2E2_4334	0.43	+0.4
5,056,840	+		Pf6N2E2_4334	0.44	+0.8
5,056,840	+		Pf6N2E2_4334	0.44	+1.2
5,056,840	+		Pf6N2E2_4334	0.44	-0.3