Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4261

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,958,231	-				+0.7
4,958,231	-				+0.1
4,958,298	-				+1.2
4,958,309	+				+0.8
4,958,309	+				+0.6
4,958,309	+				-0.1
4,958,309	+				+0.6
4,958,310	-				+0.1
4,958,399	+				+0.6
4,958,399	+				+1.6
4,958,399	+				-1.1
4,958,399	+				+0.4
4,958,400	-				+0.5
4,958,447	+		Pf6N2E2_4260	0.13	+3.2
4,958,447	+		Pf6N2E2_4260	0.13	+0.4
4,958,447	+		Pf6N2E2_4260	0.13	+0.9
4,958,448	-		Pf6N2E2_4260	0.14	+0.4
4,958,448	-		Pf6N2E2_4260	0.14	-0.8
4,958,448	-		Pf6N2E2_4260	0.14	+1.7
4,958,450	+		Pf6N2E2_4260	0.14	+0.6
4,958,450	+		Pf6N2E2_4260	0.14	-0.1
4,958,450	+		Pf6N2E2_4260	0.14	+0.4
4,958,450	+		Pf6N2E2_4260	0.14	+0.7
4,958,450	+		Pf6N2E2_4260	0.14	+1.4
4,958,451	-		Pf6N2E2_4260	0.14	+0.3
4,958,451	-		Pf6N2E2_4260	0.14	-0.5
4,958,451	-		Pf6N2E2_4260	0.14	-0.2
4,958,451	-		Pf6N2E2_4260	0.14	+0.8
4,958,718	-		Pf6N2E2_4260	0.44	-0.7
4,958,879	+		Pf6N2E2_4260	0.63	+1.8
4,958,880	-		Pf6N2E2_4260	0.63	+0.3
4,958,880	-		Pf6N2E2_4260	0.63	-0.3
4,958,880	-		Pf6N2E2_4260	0.63	-0.4
4,958,908	+		Pf6N2E2_4260	0.66	-0.5
4,958,909	-		Pf6N2E2_4260	0.66	-0.9
4,958,909	-		Pf6N2E2_4260	0.66	+0.8
4,959,279	-		Pf6N2E2_4261	0.13	+0.2
4,959,279	-		Pf6N2E2_4261	0.13	+0.6
4,959,279	-		Pf6N2E2_4261	0.13	-0.1
4,959,279	-		Pf6N2E2_4261	0.13	+0.8
4,959,298	-		Pf6N2E2_4261	0.15	+1.0
4,959,535	-		Pf6N2E2_4261	0.51	+0.2
4,959,546	+		Pf6N2E2_4261	0.52	+0.7
4,959,546	+		Pf6N2E2_4261	0.52	+0.6
4,959,546	+		Pf6N2E2_4261	0.52	-0.6
4,959,546	+		Pf6N2E2_4261	0.52	-0.1
4,959,546	+		Pf6N2E2_4261	0.52	-0.2
4,959,547	-		Pf6N2E2_4261	0.53	-0.9
4,959,547	-		Pf6N2E2_4261	0.53	-0.1
4,959,547	-		Pf6N2E2_4261	0.53	-0.9
4,959,547	-		Pf6N2E2_4261	0.53	+0.1
4,959,547	-		Pf6N2E2_4261	0.53	+0.9
4,959,554	+		Pf6N2E2_4261	0.54	+0.5
4,959,554	+		Pf6N2E2_4261	0.54	+0.3
4,959,554	+		Pf6N2E2_4261	0.54	+0.7
4,959,554	+		Pf6N2E2_4261	0.54	+0.7
4,959,554	+		Pf6N2E2_4261	0.54	-0.1
4,959,554	+		Pf6N2E2_4261	0.54	-0.1
4,959,555	-		Pf6N2E2_4261	0.54	+0.4
4,959,735	+		Pf6N2E2_4261	0.81	+0.1
4,959,736	-		Pf6N2E2_4261	0.81	+0.2
4,959,736	-		Pf6N2E2_4261	0.81	+0.6
4,959,935	+				+1.4
4,959,935	+				-0.9
4,959,935	+				+0.4
4,959,935	+				-1.0
4,959,936	-				+0.1
4,959,936	-				+0.1
4,960,148	+		Pf6N2E2_4262	0.35	+1.0
4,960,148	+		Pf6N2E2_4262	0.35	+0.6
4,960,148	+		Pf6N2E2_4262	0.35	-0.2
4,960,149	-		Pf6N2E2_4262	0.35	+1.1
4,960,149	-		Pf6N2E2_4262	0.35	-1.1
4,960,149	-		Pf6N2E2_4262	0.35	+0.1
4,960,149	-		Pf6N2E2_4262	0.35	+0.4
4,960,149	-		Pf6N2E2_4262	0.35	+0.1
4,960,178	-		Pf6N2E2_4262	0.39	-2.3
4,960,249	+		Pf6N2E2_4262	0.47	-0.4
4,960,323	+		Pf6N2E2_4262	0.56	+0.8
4,960,324	-		Pf6N2E2_4262	0.56	+0.5
4,960,367	+		Pf6N2E2_4262	0.61	+0.1
4,960,367	+		Pf6N2E2_4262	0.61	-0.9
4,960,368	-		Pf6N2E2_4262	0.62	+1.1
4,960,442	+		Pf6N2E2_4262	0.71	-0.1
4,960,442	+		Pf6N2E2_4262	0.71	+1.1
4,960,442	+		Pf6N2E2_4262	0.71	-0.6
4,960,442	+		Pf6N2E2_4262	0.71	+0.6
4,960,442	+		Pf6N2E2_4262	0.71	-0.6
4,960,442	+		Pf6N2E2_4262	0.71	+1.0
4,960,442	+		Pf6N2E2_4262	0.71	+0.4
4,960,442	+		Pf6N2E2_4262	0.71	-0.9
4,960,443	-		Pf6N2E2_4262	0.71	+0.6
4,960,450	+		Pf6N2E2_4262	0.72	-0.3
4,960,451	-		Pf6N2E2_4262	0.72	-1.1
4,960,451	-		Pf6N2E2_4262	0.72	-0.4
4,960,479	-		Pf6N2E2_4262	0.75	+0.5
4,960,523	+		Pf6N2E2_4262	0.80	+1.2
4,960,523	+		Pf6N2E2_4262	0.80	+2.6
4,960,569	+		Pf6N2E2_4262	0.86	+1.6
4,960,569	+		Pf6N2E2_4262	0.86	+0.3
4,960,569	+		Pf6N2E2_4262	0.86	-0.2
4,960,570	-		Pf6N2E2_4262	0.86	+0.6
4,960,570	-		Pf6N2E2_4262	0.86	-1.6
4,960,571	+		Pf6N2E2_4262	0.86	+0.2
4,960,572	-		Pf6N2E2_4262	0.86	+0.4
4,960,572	-		Pf6N2E2_4262	0.86	+0.9
4,960,572	-		Pf6N2E2_4262	0.86	-0.5
4,960,582	+		Pf6N2E2_4262	0.88	+1.0
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	-0.1
4,960,582	+		Pf6N2E2_4262	0.88	+1.1
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-1.3
4,960,582	+		Pf6N2E2_4262	0.88	+0.1
4,960,582	+		Pf6N2E2_4262	0.88	+0.3
4,960,582	+		Pf6N2E2_4262	0.88	-0.1
4,960,582	+		Pf6N2E2_4262	0.88	+0.4
4,960,582	+		Pf6N2E2_4262	0.88	+0.5
4,960,582	+		Pf6N2E2_4262	0.88	-0.8
4,960,582	+		Pf6N2E2_4262	0.88	-0.6
4,960,582	+		Pf6N2E2_4262	0.88	-0.1
4,960,582	+		Pf6N2E2_4262	0.88	-0.3
4,960,583	-		Pf6N2E2_4262	0.88	+0.4
4,960,583	-		Pf6N2E2_4262	0.88	-1.1
4,960,583	-		Pf6N2E2_4262	0.88	+0.9
4,960,583	-		Pf6N2E2_4262	0.88	-1.1
4,960,583	-		Pf6N2E2_4262	0.88	+0.3
4,960,583	-		Pf6N2E2_4262	0.88	+1.3
4,960,583	-		Pf6N2E2_4262	0.88	+0.6
4,960,583	-		Pf6N2E2_4262	0.88	+1.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.6
4,960,583	-		Pf6N2E2_4262	0.88	+1.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.6
4,960,583	-		Pf6N2E2_4262	0.88	+0.9
4,960,583	-		Pf6N2E2_4262	0.88	+1.8