Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4250

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,943,132	+		Pf6N2E2_4249	0.31	-0.1
4,943,229	+		Pf6N2E2_4249	0.39	-0.4
4,943,229	+		Pf6N2E2_4249	0.39	-0.8
4,943,230	-		Pf6N2E2_4249	0.39	-0.0
4,943,230	-		Pf6N2E2_4249	0.39	+0.5
4,943,230	-		Pf6N2E2_4249	0.39	-2.5
4,943,230	-		Pf6N2E2_4249	0.39	-0.2
4,943,230	-		Pf6N2E2_4249	0.39	-0.5
4,943,232	+		Pf6N2E2_4249	0.40	-0.0
4,943,404	+		Pf6N2E2_4249	0.54	-0.9
4,943,405	-		Pf6N2E2_4249	0.54	-0.6
4,943,405	-		Pf6N2E2_4249	0.54	-1.1
4,943,713	+		Pf6N2E2_4249	0.80	-0.8
4,943,713	+		Pf6N2E2_4249	0.80	+0.5
4,943,713	+		Pf6N2E2_4249	0.80	-1.8
4,943,713	+		Pf6N2E2_4249	0.80	-0.5
4,943,714	-		Pf6N2E2_4249	0.80	+0.6
4,943,714	-		Pf6N2E2_4249	0.80	+0.6
4,943,817	+		Pf6N2E2_4249	0.89	-0.0
4,943,817	+		Pf6N2E2_4249	0.89	+0.9
4,943,817	+		Pf6N2E2_4249	0.89	+0.6
4,943,817	+		Pf6N2E2_4249	0.89	+0.7
4,943,817	+		Pf6N2E2_4249	0.89	-0.2
4,943,817	+		Pf6N2E2_4249	0.89	-0.4
4,943,817	+		Pf6N2E2_4249	0.89	+0.5
4,943,817	+		Pf6N2E2_4249	0.89	-0.8
4,943,817	+		Pf6N2E2_4249	0.89	+0.6
4,943,817	+		Pf6N2E2_4249	0.89	-1.4
4,943,817	+		Pf6N2E2_4249	0.89	-1.4
4,943,817	+		Pf6N2E2_4249	0.89	+0.1
4,943,817	+		Pf6N2E2_4249	0.89	-0.1
4,943,818	-		Pf6N2E2_4249	0.89	+0.4
4,943,818	-		Pf6N2E2_4249	0.89	-1.0
4,943,818	-		Pf6N2E2_4249	0.89	-0.7
4,943,818	-		Pf6N2E2_4249	0.89	+0.1
4,943,818	-		Pf6N2E2_4249	0.89	-0.7
4,943,818	-		Pf6N2E2_4249	0.89	+0.5
4,943,818	-		Pf6N2E2_4249	0.89	-2.7
4,943,818	-		Pf6N2E2_4249	0.89	+0.3
4,943,818	-		Pf6N2E2_4249	0.89	-0.2
4,943,818	-		Pf6N2E2_4249	0.89	+0.1
4,943,818	-		Pf6N2E2_4249	0.89	-0.3
4,943,818	-		Pf6N2E2_4249	0.89	-0.0
4,943,818	-		Pf6N2E2_4249	0.89	-1.8
4,943,818	-		Pf6N2E2_4249	0.89	-0.3
4,943,844	+				+0.2
4,943,844	+				-1.6
4,943,844	+				+0.0
4,943,845	-				-0.4
4,943,845	-				+0.8
4,943,845	-				+0.5
4,943,845	-				+0.8
4,943,845	-				+0.5
4,943,950	+				+0.5
4,943,950	+				+0.4
4,943,950	+				+0.1
4,944,069	+				-0.2
4,944,161	+		Pf6N2E2_4250	0.10	+0.6
4,944,161	+		Pf6N2E2_4250	0.10	+0.6
4,944,162	-		Pf6N2E2_4250	0.10	+0.3
4,944,167	+		Pf6N2E2_4250	0.11	-0.3
4,944,167	+		Pf6N2E2_4250	0.11	-0.7
4,944,167	+		Pf6N2E2_4250	0.11	-0.0
4,944,167	+		Pf6N2E2_4250	0.11	+0.2
4,944,167	+		Pf6N2E2_4250	0.11	-0.3
4,944,167	+		Pf6N2E2_4250	0.11	+0.3
4,944,167	+		Pf6N2E2_4250	0.11	+0.8
4,944,167	+		Pf6N2E2_4250	0.11	+0.5
4,944,167	+		Pf6N2E2_4250	0.11	-0.0
4,944,167	+		Pf6N2E2_4250	0.11	-0.4
4,944,168	-		Pf6N2E2_4250	0.11	+0.0
4,944,168	-		Pf6N2E2_4250	0.11	+0.1
4,944,168	-		Pf6N2E2_4250	0.11	-0.2
4,944,168	-		Pf6N2E2_4250	0.11	-0.0
4,944,168	-		Pf6N2E2_4250	0.11	+0.8
4,944,168	-		Pf6N2E2_4250	0.11	+0.7
4,944,185	+		Pf6N2E2_4250	0.11	+0.5
4,944,185	+		Pf6N2E2_4250	0.11	+0.5
4,944,185	+		Pf6N2E2_4250	0.11	+0.6
4,944,185	+		Pf6N2E2_4250	0.11	-0.5
4,944,185	+		Pf6N2E2_4250	0.11	-2.4
4,944,185	+		Pf6N2E2_4250	0.11	+0.4
4,944,186	-		Pf6N2E2_4250	0.11	+0.2
4,944,186	-		Pf6N2E2_4250	0.11	-1.3
4,944,186	-		Pf6N2E2_4250	0.11	-0.7
4,944,323	+		Pf6N2E2_4250	0.18	+1.0
4,944,323	+		Pf6N2E2_4250	0.18	-0.2
4,944,323	+		Pf6N2E2_4250	0.18	-0.5
4,944,323	+		Pf6N2E2_4250	0.18	+0.1
4,944,323	+		Pf6N2E2_4250	0.18	-0.7
4,944,323	+		Pf6N2E2_4250	0.18	-0.1
4,944,323	+		Pf6N2E2_4250	0.18	-0.2
4,944,324	-		Pf6N2E2_4250	0.18	-0.5
4,944,324	-		Pf6N2E2_4250	0.18	-0.4
4,944,324	-		Pf6N2E2_4250	0.18	-0.4
4,944,440	+		Pf6N2E2_4250	0.23	-0.7
4,944,440	+		Pf6N2E2_4250	0.23	-0.6
4,944,440	+		Pf6N2E2_4250	0.23	-0.4
4,944,441	-		Pf6N2E2_4250	0.23	+0.9
4,944,441	-		Pf6N2E2_4250	0.23	+0.0
4,944,441	-		Pf6N2E2_4250	0.23	+0.6
4,944,441	-		Pf6N2E2_4250	0.23	+0.1
4,944,441	-		Pf6N2E2_4250	0.23	+0.7
4,944,617	+		Pf6N2E2_4250	0.32	+0.6
4,944,618	-		Pf6N2E2_4250	0.32	+0.4
4,944,618	-		Pf6N2E2_4250	0.32	+1.0
4,944,653	+		Pf6N2E2_4250	0.33	-0.1
4,944,653	+		Pf6N2E2_4250	0.33	+0.4
4,944,653	+		Pf6N2E2_4250	0.33	+0.1
4,944,654	-		Pf6N2E2_4250	0.33	-0.6
4,944,654	-		Pf6N2E2_4250	0.33	+0.2
4,944,654	-		Pf6N2E2_4250	0.33	-0.3
4,944,689	+		Pf6N2E2_4250	0.35	+1.2
4,944,689	+		Pf6N2E2_4250	0.35	-0.5
4,944,791	+		Pf6N2E2_4250	0.40	+0.7
4,944,791	+		Pf6N2E2_4250	0.40	+0.3
4,944,791	+		Pf6N2E2_4250	0.40	+0.1
4,944,792	-		Pf6N2E2_4250	0.40	+1.2
4,944,792	-		Pf6N2E2_4250	0.40	+1.0
4,944,917	+		Pf6N2E2_4250	0.45	+0.8
4,944,917	+		Pf6N2E2_4250	0.45	+0.6
4,944,917	+		Pf6N2E2_4250	0.45	+1.5
4,944,918	-		Pf6N2E2_4250	0.46	-1.7
4,944,918	-		Pf6N2E2_4250	0.46	+0.3
4,944,918	-		Pf6N2E2_4250	0.46	-3.2
4,944,932	+		Pf6N2E2_4250	0.46	+0.1
4,944,933	-		Pf6N2E2_4250	0.46	+0.6
4,945,043	+		Pf6N2E2_4250	0.51	-1.4
4,945,043	+		Pf6N2E2_4250	0.51	-0.3
4,945,181	+		Pf6N2E2_4250	0.58	-0.4
4,945,181	+		Pf6N2E2_4250	0.58	-0.5
4,945,182	-		Pf6N2E2_4250	0.58	-0.2
4,945,205	+		Pf6N2E2_4250	0.59	-0.1
4,945,206	-		Pf6N2E2_4250	0.59	+2.6
4,945,223	+		Pf6N2E2_4250	0.60	+0.4
4,945,223	+		Pf6N2E2_4250	0.60	-0.5
4,945,223	+		Pf6N2E2_4250	0.60	+0.1
4,945,223	+		Pf6N2E2_4250	0.60	+0.8
4,945,223	+		Pf6N2E2_4250	0.60	-0.0
4,945,224	-		Pf6N2E2_4250	0.60	+0.5
4,945,224	-		Pf6N2E2_4250	0.60	+0.6
4,945,224	-		Pf6N2E2_4250	0.60	+0.1
4,945,224	-		Pf6N2E2_4250	0.60	+0.2
4,945,224	-		Pf6N2E2_4250	0.60	-0.1
4,945,230	-		Pf6N2E2_4250	0.60	+0.4
4,945,283	+		Pf6N2E2_4250	0.62	+1.5
4,945,283	+		Pf6N2E2_4250	0.62	+1.8
4,945,283	+		Pf6N2E2_4250	0.62	-0.4
4,945,284	-		Pf6N2E2_4250	0.63	-0.6
4,945,284	-		Pf6N2E2_4250	0.63	+0.1
4,945,284	-		Pf6N2E2_4250	0.63	-0.3
4,945,284	-		Pf6N2E2_4250	0.63	+0.5
4,945,284	-		Pf6N2E2_4250	0.63	-0.4
4,945,340	+		Pf6N2E2_4250	0.65	+0.0
4,945,340	+		Pf6N2E2_4250	0.65	-0.6
4,945,340	+		Pf6N2E2_4250	0.65	-0.1
4,945,340	+		Pf6N2E2_4250	0.65	+2.6
4,945,340	+		Pf6N2E2_4250	0.65	+0.6
4,945,340	+		Pf6N2E2_4250	0.65	+0.7
4,945,340	+		Pf6N2E2_4250	0.65	+0.4
4,945,340	+		Pf6N2E2_4250	0.65	+0.4
4,945,340	+		Pf6N2E2_4250	0.65	+0.5
4,945,340	+		Pf6N2E2_4250	0.65	-0.6
4,945,340	+		Pf6N2E2_4250	0.65	-0.1
4,945,340	+		Pf6N2E2_4250	0.65	+1.2
4,945,341	-		Pf6N2E2_4250	0.65	-0.6
4,945,341	-		Pf6N2E2_4250	0.65	+1.2
4,945,341	-		Pf6N2E2_4250	0.65	+0.2
4,945,341	-		Pf6N2E2_4250	0.65	-0.0
4,945,341	-		Pf6N2E2_4250	0.65	-1.1
4,945,341	-		Pf6N2E2_4250	0.65	-0.2
4,945,341	-		Pf6N2E2_4250	0.65	+0.5
4,945,341	-		Pf6N2E2_4250	0.65	-1.7
4,945,341	-		Pf6N2E2_4250	0.65	+0.4
4,945,341	-		Pf6N2E2_4250	0.65	-2.6
4,945,341	-		Pf6N2E2_4250	0.65	+0.2
4,945,341	-		Pf6N2E2_4250	0.65	-0.1
4,945,341	-		Pf6N2E2_4250	0.65	-0.5
4,945,341	-		Pf6N2E2_4250	0.65	-0.3
4,945,341	-		Pf6N2E2_4250	0.65	+0.9
4,945,341	-		Pf6N2E2_4250	0.65	-1.1
4,945,341	-		Pf6N2E2_4250	0.65	+0.4
4,945,341	-		Pf6N2E2_4250	0.65	+0.8
4,945,341	-		Pf6N2E2_4250	0.65	-0.5
4,945,341	-		Pf6N2E2_4250	0.65	-1.3
4,945,341	-		Pf6N2E2_4250	0.65	+0.3
4,945,427	+		Pf6N2E2_4250	0.69	+0.1
4,945,428	-		Pf6N2E2_4250	0.69	+0.1
4,945,526	+		Pf6N2E2_4250	0.74	-0.7
4,945,526	+		Pf6N2E2_4250	0.74	+1.3
4,945,527	-		Pf6N2E2_4250	0.74	+0.1
4,945,577	+		Pf6N2E2_4250	0.76	+1.6
4,945,595	+		Pf6N2E2_4250	0.77	+0.6
4,945,616	+		Pf6N2E2_4250	0.78	+0.1
4,945,616	+		Pf6N2E2_4250	0.78	+0.5
4,945,616	+		Pf6N2E2_4250	0.78	-0.1
4,945,616	+		Pf6N2E2_4250	0.78	-1.4
4,945,616	+		Pf6N2E2_4250	0.78	-0.2
4,945,616	+		Pf6N2E2_4250	0.78	-0.4
4,945,616	+		Pf6N2E2_4250	0.78	-0.1
4,945,616	+		Pf6N2E2_4250	0.78	+0.2
4,945,617	-		Pf6N2E2_4250	0.78	+1.0
4,945,771	+		Pf6N2E2_4250	0.85	-0.0
4,945,847	+		Pf6N2E2_4250	0.89	-0.2
4,945,847	+		Pf6N2E2_4250	0.89	-0.6
4,945,856	+		Pf6N2E2_4250	0.89	+0.7
4,945,856	+		Pf6N2E2_4250	0.89	-0.3
4,945,856	+		Pf6N2E2_4250	0.89	+0.3
4,945,856	+		Pf6N2E2_4250	0.89	+0.6
4,945,857	-		Pf6N2E2_4250	0.89	+1.0
4,945,857	-		Pf6N2E2_4250	0.89	+1.3
4,945,857	-		Pf6N2E2_4250	0.89	-0.6
4,945,874	+		Pf6N2E2_4250	0.90	+0.1
4,945,874	+		Pf6N2E2_4250	0.90	-0.7
4,945,874	+		Pf6N2E2_4250	0.90	+0.4
4,945,874	+		Pf6N2E2_4250	0.90	-1.5
4,945,875	-				+0.3
4,945,875	-				+1.6
4,945,875	-				-0.2
4,945,875	-				+0.5
4,945,875	-				-0.8
4,945,875	-				-0.2
4,945,875	-				+0.2
4,945,875	-				-0.5
4,945,875	-				-0.7
4,945,875	-				-0.2
4,945,944	-				-0.1
4,945,944	-				+1.9
4,945,944	-				-0.7
4,945,988	+				+0.4
4,945,988	+				-0.3
4,945,989	-				+0.3
4,946,115	+				+0.8
4,946,115	+				+0.0
4,946,147	+				-0.7
4,946,148	-				-1.7
4,946,148	-				-1.1
4,946,264	+				+0.3
4,946,264	+				+0.2
4,946,264	+				-0.1
4,946,264	+				+1.0
4,946,265	-				-0.2
4,946,265	-				+0.4
4,946,265	-				-2.4
4,946,265	-				-0.9
4,946,265	-				-0.2
4,946,265	-				+0.5
4,946,391	-				+0.6
4,946,391	-				+0.8
4,946,391	-				+0.0
4,946,543	+		Pf6N2E2_4251	0.20	-0.0
4,946,543	+		Pf6N2E2_4251	0.20	+1.4
4,946,543	+		Pf6N2E2_4251	0.20	+0.7
4,946,543	+		Pf6N2E2_4251	0.20	+0.7
4,946,543	+		Pf6N2E2_4251	0.20	-0.3
4,946,543	+		Pf6N2E2_4251	0.20	-0.5
4,946,543	+		Pf6N2E2_4251	0.20	+0.2
4,946,543	+		Pf6N2E2_4251	0.20	+1.6
4,946,543	+		Pf6N2E2_4251	0.20	+1.2
4,946,544	-		Pf6N2E2_4251	0.20	-1.5
4,946,544	-		Pf6N2E2_4251	0.20	+0.7
4,946,544	-		Pf6N2E2_4251	0.20	+1.1
4,946,544	-		Pf6N2E2_4251	0.20	+0.1
4,946,544	-		Pf6N2E2_4251	0.20	-0.3
4,946,544	-		Pf6N2E2_4251	0.20	-0.2
4,946,544	-		Pf6N2E2_4251	0.20	+0.6
4,946,609	+		Pf6N2E2_4251	0.25	-0.9
4,946,609	+		Pf6N2E2_4251	0.25	+0.3
4,946,609	+		Pf6N2E2_4251	0.25	+0.5
4,946,609	+		Pf6N2E2_4251	0.25	+1.1
4,946,609	+		Pf6N2E2_4251	0.25	+2.0
4,946,610	-		Pf6N2E2_4251	0.25	-0.0
4,946,610	-		Pf6N2E2_4251	0.25	-0.7
4,946,610	-		Pf6N2E2_4251	0.25	-0.6
4,946,610	-		Pf6N2E2_4251	0.25	+0.6
4,946,610	-		Pf6N2E2_4251	0.25	-1.4
4,946,610	-		Pf6N2E2_4251	0.25	+0.6
4,946,633	+		Pf6N2E2_4251	0.26	-1.7
4,946,633	+		Pf6N2E2_4251	0.26	-0.2
4,946,633	+		Pf6N2E2_4251	0.26	-0.9
4,946,633	+		Pf6N2E2_4251	0.26	+0.0
4,946,633	+		Pf6N2E2_4251	0.26	+0.9
4,946,633	+		Pf6N2E2_4251	0.26	-0.7
4,946,633	+		Pf6N2E2_4251	0.26	+0.0
4,946,633	+		Pf6N2E2_4251	0.26	-1.4
4,946,633	+		Pf6N2E2_4251	0.26	-0.1
4,946,634	-		Pf6N2E2_4251	0.26	+0.7
4,946,634	-		Pf6N2E2_4251	0.26	-0.5
4,946,634	-		Pf6N2E2_4251	0.26	+1.2
4,946,634	-		Pf6N2E2_4251	0.26	-0.5
4,946,634	-		Pf6N2E2_4251	0.26	+0.8
4,946,864	+		Pf6N2E2_4251	0.43	-0.7
4,946,865	-		Pf6N2E2_4251	0.43	-0.8
4,946,865	-		Pf6N2E2_4251	0.43	+0.2
4,946,865	-		Pf6N2E2_4251	0.43	-0.4
4,946,865	-		Pf6N2E2_4251	0.43	-0.1
4,946,865	-		Pf6N2E2_4251	0.43	+1.1
4,946,865	-		Pf6N2E2_4251	0.43	-0.4
4,946,976	+		Pf6N2E2_4251	0.51	+0.1
4,946,977	-		Pf6N2E2_4251	0.51	+0.5
4,946,985	+		Pf6N2E2_4251	0.52	-0.3
4,946,986	-		Pf6N2E2_4251	0.52	-0.5
4,947,051	-		Pf6N2E2_4251	0.56	-0.9
4,947,051	-		Pf6N2E2_4251	0.56	-0.6