Experiment: Doxycycline hyclate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4198 and Pf6N2E2_4199 are separated by 39 nucleotides Pf6N2E2_4199 and Pf6N2E2_4200 are separated by 927 nucleotides
Pf6N2E2_4198 - DNA polymerase III beta subunit (EC 2.7.7.7), at 4,886,301 to 4,887,404
_4198
Pf6N2E2_4199 - Chromosomal replication initiator protein DnaA, at 4,887,444 to 4,888,964
_4199
Pf6N2E2_4200 - Ribonuclease P protein component (EC 3.1.26.5), at 4,889,892 to 4,890,089
_4200
Position (kb)
4887
4888
4889 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4887.423 kb on - strand at 4887.423 kb on - strand at 4887.423 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4889.040 kb on - strand at 4889.040 kb on - strand at 4889.072 kb on + strand at 4889.073 kb on - strand at 4889.073 kb on - strand at 4889.073 kb on - strand at 4889.272 kb on + strand at 4889.284 kb on + strand at 4889.332 kb on + strand at 4889.358 kb on + strand at 4889.371 kb on + strand at 4889.371 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.379 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Doxycycline hyclate 0.0001 mg/ml remove 4,887,423 - +0.2 4,887,423 - +0.3 4,887,423 - -0.2 4,887,426 - +0.2 4,887,426 - -0.3 4,887,426 - +2.1 4,887,426 - +0.3 4,887,426 - -0.2 4,889,040 - +0.1 4,889,040 - -1.8 4,889,072 + +1.3 4,889,073 - -0.1 4,889,073 - +0.5 4,889,073 - +0.5 4,889,272 + -1.6 4,889,284 + -0.3 4,889,332 + -0.1 4,889,358 + -0.1 4,889,371 + +0.9 4,889,371 + -0.1 4,889,377 + -0.6 4,889,377 + -1.9 4,889,377 + -0.4 4,889,377 + -0.1 4,889,377 + +0.0 4,889,379 + -1.5 4,889,383 + +1.6 4,889,383 + +0.4 4,889,383 + -0.5 4,889,383 + +0.3 4,889,422 + +0.6 4,889,422 + +0.5 4,889,422 + -0.7 4,889,422 + -0.5 4,889,422 + -2.5
Or see this region's nucleotide sequence