Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4198

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,885,307	-		Pf6N2E2_4197	0.12	+0.6
4,885,307	-		Pf6N2E2_4197	0.12	-0.5
4,885,307	-		Pf6N2E2_4197	0.12	-0.6
4,885,380	-		Pf6N2E2_4197	0.19	-0.7
4,885,380	-		Pf6N2E2_4197	0.19	-0.7
4,885,380	-		Pf6N2E2_4197	0.19	+1.0
4,885,384	-		Pf6N2E2_4197	0.19	+0.5
4,885,384	-		Pf6N2E2_4197	0.19	-0.5
4,885,384	-		Pf6N2E2_4197	0.19	-1.4
4,885,384	-		Pf6N2E2_4197	0.19	+0.3
4,885,384	-		Pf6N2E2_4197	0.19	+0.1
4,885,384	-		Pf6N2E2_4197	0.19	+0.3
4,885,384	-		Pf6N2E2_4197	0.19	-0.6
4,885,448	-		Pf6N2E2_4197	0.25	-0.5
4,885,617	-		Pf6N2E2_4197	0.41	-0.2
4,885,617	-		Pf6N2E2_4197	0.41	-2.2
4,885,617	-		Pf6N2E2_4197	0.41	+0.6
4,885,617	-		Pf6N2E2_4197	0.41	-1.2
4,885,617	-		Pf6N2E2_4197	0.41	+0.6
4,885,692	-		Pf6N2E2_4197	0.48	-1.7
4,885,692	-		Pf6N2E2_4197	0.48	-1.4
4,885,692	-		Pf6N2E2_4197	0.48	-0.7
4,885,692	-		Pf6N2E2_4197	0.48	-2.0
4,885,692	-		Pf6N2E2_4197	0.48	-1.0
4,885,692	-		Pf6N2E2_4197	0.48	+0.8
4,885,704	-		Pf6N2E2_4197	0.49	+0.6
4,885,774	-		Pf6N2E2_4197	0.56	+1.2
4,885,906	+		Pf6N2E2_4197	0.68	-2.3
4,885,906	+		Pf6N2E2_4197	0.68	-0.2
4,885,906	+		Pf6N2E2_4197	0.68	-0.8
4,885,907	-		Pf6N2E2_4197	0.68	-1.4
4,886,037	+		Pf6N2E2_4197	0.80	-0.8
4,886,093	+		Pf6N2E2_4197	0.85	-1.8
4,886,093	+		Pf6N2E2_4197	0.85	-2.4
4,886,094	-		Pf6N2E2_4197	0.85	+0.8
4,886,272	+				-3.1
4,886,273	-				-2.0
4,886,273	-				-1.5
4,886,273	-				-0.8
4,886,273	-				-0.4
4,886,282	+				-0.7
4,886,282	+				-1.6
4,886,282	+				-1.3
4,886,282	+				-2.2
4,886,282	+				-1.3
4,886,282	+				-1.4
4,886,282	+				-0.2
4,886,282	+				-1.7
4,886,283	-				-0.7
4,886,283	-				+0.2
4,886,283	-				+0.4
4,886,283	-				-0.6
4,886,283	-				-0.0
4,886,283	-				-0.2
4,886,283	-				+0.6
4,886,283	-				-0.2
4,886,283	-				-0.8
4,886,283	-				-0.9
4,886,283	-				-1.7
4,886,283	-				-0.1
4,886,283	-				+0.7
4,886,283	-				-0.2
4,886,283	-				-0.2
4,886,283	-				+0.1
4,886,283	-				-0.1
4,886,302	+				-2.1
4,886,302	+				-3.5
4,886,302	+				+1.0
4,886,302	+				-1.9
4,886,303	-				-0.9
4,886,303	-				+0.5
4,886,303	-				+0.8
4,886,303	-				-1.5
4,887,423	-				+0.2
4,887,423	-				+0.3
4,887,423	-				-0.2
4,887,426	-				+0.2
4,887,426	-				-0.3
4,887,426	-				+2.1
4,887,426	-				+0.3
4,887,426	-				-0.2