Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4031

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,703,367	+		Pf6N2E2_4030	0.52	+1.3
4,703,368	-		Pf6N2E2_4030	0.52	+0.2
4,703,373	+		Pf6N2E2_4030	0.52	+0.5
4,703,373	+		Pf6N2E2_4030	0.52	+2.9
4,703,373	+		Pf6N2E2_4030	0.52	+1.8
4,703,374	-		Pf6N2E2_4030	0.52	+0.3
4,703,374	-		Pf6N2E2_4030	0.52	+1.4
4,703,569	+		Pf6N2E2_4030	0.62	+0.8
4,703,715	+		Pf6N2E2_4030	0.69	+1.9
4,703,947	+		Pf6N2E2_4030	0.81	+1.9
4,703,947	+		Pf6N2E2_4030	0.81	+0.4
4,703,947	+		Pf6N2E2_4030	0.81	+1.0
4,703,948	-		Pf6N2E2_4030	0.81	+0.6
4,703,948	-		Pf6N2E2_4030	0.81	+0.9
4,703,949	+		Pf6N2E2_4030	0.81	+0.0
4,703,949	+		Pf6N2E2_4030	0.81	+1.8
4,703,949	+		Pf6N2E2_4030	0.81	+1.6
4,703,949	+		Pf6N2E2_4030	0.81	+1.3
4,703,949	+		Pf6N2E2_4030	0.81	+0.2
4,703,950	-		Pf6N2E2_4030	0.81	+1.5
4,703,950	-		Pf6N2E2_4030	0.81	+1.3
4,703,950	-		Pf6N2E2_4030	0.81	+0.1
4,703,950	-		Pf6N2E2_4030	0.81	+0.2
4,703,950	-		Pf6N2E2_4030	0.81	+0.6
4,703,950	-		Pf6N2E2_4030	0.81	+0.4
4,703,980	-		Pf6N2E2_4030	0.82	+0.1
4,703,980	-		Pf6N2E2_4030	0.82	+0.6
4,704,084	+		Pf6N2E2_4030	0.88	+1.8
4,704,084	+		Pf6N2E2_4030	0.88	+1.0
4,704,085	-		Pf6N2E2_4030	0.88	+0.6
4,704,085	-		Pf6N2E2_4030	0.88	+1.5
4,704,085	-		Pf6N2E2_4030	0.88	+1.4
4,704,085	-		Pf6N2E2_4030	0.88	+0.6
4,704,181	-				+1.0
4,704,354	+				+1.2
4,704,354	+				+0.7
4,704,354	+				-0.8
4,704,355	-				-0.7
4,704,355	-				+0.3
4,704,501	+				+1.4
4,704,502	-				+0.1
4,704,502	-				-0.1
4,704,516	+				+1.9
4,704,516	+				+2.1
4,704,516	+				+0.5
4,704,517	-				-0.3
4,704,517	-				+0.7
4,704,517	-				+0.3
4,704,570	+				+1.4
4,704,570	+				+2.5
4,704,571	-				+0.3
4,704,630	+		Pf6N2E2_4031	0.12	+0.5
4,704,630	+		Pf6N2E2_4031	0.12	+2.0
4,704,631	-		Pf6N2E2_4031	0.12	-1.0
4,704,708	+		Pf6N2E2_4031	0.15	+2.6
4,704,708	+		Pf6N2E2_4031	0.15	+0.6
4,704,708	+		Pf6N2E2_4031	0.15	+1.5
4,704,708	+		Pf6N2E2_4031	0.15	+1.4
4,704,708	+		Pf6N2E2_4031	0.15	-0.3
4,704,708	+		Pf6N2E2_4031	0.15	+2.3
4,704,709	-		Pf6N2E2_4031	0.15	+0.3
4,704,709	-		Pf6N2E2_4031	0.15	+0.0
4,704,709	-		Pf6N2E2_4031	0.15	+1.1
4,704,709	-		Pf6N2E2_4031	0.15	-0.2
4,704,709	-		Pf6N2E2_4031	0.15	+0.5
4,704,709	-		Pf6N2E2_4031	0.15	-0.9
4,704,712	+		Pf6N2E2_4031	0.15	+2.0
4,704,713	-		Pf6N2E2_4031	0.15	+0.4
4,704,888	+		Pf6N2E2_4031	0.22	+1.1
4,704,888	+		Pf6N2E2_4031	0.22	+1.0
4,704,889	-		Pf6N2E2_4031	0.22	+0.5
4,704,889	-		Pf6N2E2_4031	0.22	+1.1
4,704,889	-		Pf6N2E2_4031	0.22	-0.1
4,704,889	-		Pf6N2E2_4031	0.22	+0.4
4,704,972	+		Pf6N2E2_4031	0.25	+1.8
4,704,972	+		Pf6N2E2_4031	0.25	+1.2
4,704,972	+		Pf6N2E2_4031	0.25	+2.3
4,704,972	+		Pf6N2E2_4031	0.25	+1.5
4,704,973	-		Pf6N2E2_4031	0.25	+0.6
4,704,973	-		Pf6N2E2_4031	0.25	+0.7
4,704,973	-		Pf6N2E2_4031	0.25	+0.4
4,704,973	-		Pf6N2E2_4031	0.25	+0.9
4,705,057	+		Pf6N2E2_4031	0.29	-0.2
4,705,057	+		Pf6N2E2_4031	0.29	+1.3
4,705,057	+		Pf6N2E2_4031	0.29	+1.4
4,705,058	-		Pf6N2E2_4031	0.29	-0.1
4,705,131	+		Pf6N2E2_4031	0.32	+2.1
4,705,131	+		Pf6N2E2_4031	0.32	+0.9
4,705,131	+		Pf6N2E2_4031	0.32	-0.3
4,705,131	+		Pf6N2E2_4031	0.32	+0.6
4,705,131	+		Pf6N2E2_4031	0.32	+0.7
4,705,131	+		Pf6N2E2_4031	0.32	+0.8
4,705,131	+		Pf6N2E2_4031	0.32	+0.7
4,705,131	+		Pf6N2E2_4031	0.32	+0.8
4,705,131	+		Pf6N2E2_4031	0.32	+2.5
4,705,131	+		Pf6N2E2_4031	0.32	+1.0
4,705,131	+		Pf6N2E2_4031	0.32	+2.6
4,705,132	-		Pf6N2E2_4031	0.32	+1.0
4,705,132	-		Pf6N2E2_4031	0.32	+0.4
4,705,200	+		Pf6N2E2_4031	0.35	+2.0
4,705,200	+		Pf6N2E2_4031	0.35	+1.5
4,705,200	+		Pf6N2E2_4031	0.35	+1.3
4,705,200	+		Pf6N2E2_4031	0.35	+1.4
4,705,200	+		Pf6N2E2_4031	0.35	+1.4
4,705,200	+		Pf6N2E2_4031	0.35	+2.2
4,705,201	-		Pf6N2E2_4031	0.35	+0.8
4,705,201	-		Pf6N2E2_4031	0.35	+2.2
4,705,201	-		Pf6N2E2_4031	0.35	+0.8
4,705,201	-		Pf6N2E2_4031	0.35	+1.1
4,705,201	-		Pf6N2E2_4031	0.35	+0.6
4,705,456	-		Pf6N2E2_4031	0.45	-0.1
4,705,551	+		Pf6N2E2_4031	0.49	+0.1
4,705,552	-		Pf6N2E2_4031	0.49	+0.3
4,705,710	+		Pf6N2E2_4031	0.55	+2.0
4,705,710	+		Pf6N2E2_4031	0.55	+0.8
4,705,710	+		Pf6N2E2_4031	0.55	+1.7
4,705,710	+		Pf6N2E2_4031	0.55	+2.4
4,705,710	+		Pf6N2E2_4031	0.55	+2.0
4,705,710	+		Pf6N2E2_4031	0.55	+1.3
4,705,710	+		Pf6N2E2_4031	0.55	+2.3
4,705,711	-		Pf6N2E2_4031	0.55	+0.1
4,705,711	-		Pf6N2E2_4031	0.55	+1.2
4,705,713	+		Pf6N2E2_4031	0.55	+1.8
4,705,713	+		Pf6N2E2_4031	0.55	+1.3
4,705,713	+		Pf6N2E2_4031	0.55	+1.4
4,705,713	+		Pf6N2E2_4031	0.55	+1.6
4,705,714	-		Pf6N2E2_4031	0.55	+0.2
4,705,714	-		Pf6N2E2_4031	0.55	+0.8
4,705,779	+		Pf6N2E2_4031	0.58	+2.4
4,705,780	-		Pf6N2E2_4031	0.58	+0.1
4,705,819	-		Pf6N2E2_4031	0.59	+0.5
4,705,845	+		Pf6N2E2_4031	0.60	+1.0
4,705,845	+		Pf6N2E2_4031	0.60	+2.5
4,705,845	+		Pf6N2E2_4031	0.60	+2.3
4,705,845	+		Pf6N2E2_4031	0.60	+1.2
4,705,846	-		Pf6N2E2_4031	0.61	-0.0
4,705,846	-		Pf6N2E2_4031	0.61	+2.0
4,705,846	-		Pf6N2E2_4031	0.61	+0.4
4,705,846	-		Pf6N2E2_4031	0.61	+1.4
4,705,955	+		Pf6N2E2_4031	0.65	+1.6
4,705,955	+		Pf6N2E2_4031	0.65	+1.7
4,705,956	-		Pf6N2E2_4031	0.65	+1.0
4,705,956	-		Pf6N2E2_4031	0.65	+0.8
4,706,196	+		Pf6N2E2_4031	0.75	+1.3
4,706,196	+		Pf6N2E2_4031	0.75	+1.3
4,706,196	+		Pf6N2E2_4031	0.75	+2.1
4,706,197	-		Pf6N2E2_4031	0.75	+0.3
4,706,197	-		Pf6N2E2_4031	0.75	+0.6
4,706,197	-		Pf6N2E2_4031	0.75	+1.1
4,706,197	-		Pf6N2E2_4031	0.75	+0.8
4,706,197	-		Pf6N2E2_4031	0.75	+0.8
4,706,197	-		Pf6N2E2_4031	0.75	+0.7
4,706,197	-		Pf6N2E2_4031	0.75	+1.0
4,706,202	+		Pf6N2E2_4031	0.75	+1.3
4,706,202	+		Pf6N2E2_4031	0.75	+2.3
4,706,202	+		Pf6N2E2_4031	0.75	+0.8
4,706,202	+		Pf6N2E2_4031	0.75	+0.7
4,706,202	+		Pf6N2E2_4031	0.75	+0.8
4,706,202	+		Pf6N2E2_4031	0.75	+1.8
4,706,202	+		Pf6N2E2_4031	0.75	+1.6
4,706,203	-		Pf6N2E2_4031	0.75	+0.7
4,706,203	-		Pf6N2E2_4031	0.75	+1.7
4,706,203	-		Pf6N2E2_4031	0.75	+2.3
4,706,559	+		Pf6N2E2_4031	0.89	+1.5
4,706,559	+		Pf6N2E2_4031	0.89	+1.4
4,706,559	+		Pf6N2E2_4031	0.89	+1.0
4,706,560	-		Pf6N2E2_4031	0.89	+1.6
4,706,560	-		Pf6N2E2_4031	0.89	+0.9
4,706,560	-		Pf6N2E2_4031	0.89	+1.2
4,706,560	-		Pf6N2E2_4031	0.89	+0.7
4,706,679	+				+0.5
4,706,679	+				+1.1
4,706,715	+				+2.1
4,706,715	+				+3.7
4,706,801	-				+0.6
4,706,838	+		Pf6N2E2_4032	0.21	+1.9
4,706,838	+		Pf6N2E2_4032	0.21	+1.7
4,706,838	+		Pf6N2E2_4032	0.21	+1.8
4,706,838	+		Pf6N2E2_4032	0.21	+1.9
4,706,838	+		Pf6N2E2_4032	0.21	+0.8
4,706,838	+		Pf6N2E2_4032	0.21	+1.7
4,706,838	+		Pf6N2E2_4032	0.21	+1.8
4,706,838	+		Pf6N2E2_4032	0.21	+2.0
4,706,838	+		Pf6N2E2_4032	0.21	+1.9
4,706,838	+		Pf6N2E2_4032	0.21	+0.9
4,706,838	+		Pf6N2E2_4032	0.21	+1.7
4,706,838	+		Pf6N2E2_4032	0.21	+1.0
4,706,838	+		Pf6N2E2_4032	0.21	+2.2
4,706,838	+		Pf6N2E2_4032	0.21	+2.4
4,706,838	+		Pf6N2E2_4032	0.21	+1.7
4,706,838	+		Pf6N2E2_4032	0.21	+1.9
4,706,838	+		Pf6N2E2_4032	0.21	+1.9
4,706,838	+		Pf6N2E2_4032	0.21	+2.3
4,706,838	+		Pf6N2E2_4032	0.21	+1.4
4,706,838	+		Pf6N2E2_4032	0.21	+1.5
4,706,839	-		Pf6N2E2_4032	0.21	+2.4
4,706,839	-		Pf6N2E2_4032	0.21	-0.6
4,706,839	-		Pf6N2E2_4032	0.21	-0.3
4,706,839	-		Pf6N2E2_4032	0.21	-0.2
4,706,839	-		Pf6N2E2_4032	0.21	+0.7
4,706,839	-		Pf6N2E2_4032	0.21	+0.3
4,706,839	-		Pf6N2E2_4032	0.21	-0.4
4,706,839	-		Pf6N2E2_4032	0.21	+0.7
4,706,839	-		Pf6N2E2_4032	0.21	+1.4
4,706,839	-		Pf6N2E2_4032	0.21	-0.2
4,706,839	-		Pf6N2E2_4032	0.21	+0.7
4,706,839	-		Pf6N2E2_4032	0.21	+0.8
4,706,839	-		Pf6N2E2_4032	0.21	+0.9
4,706,839	-		Pf6N2E2_4032	0.21	+0.3
4,706,839	-		Pf6N2E2_4032	0.21	+0.6
4,706,839	-		Pf6N2E2_4032	0.21	+0.5
4,706,839	-		Pf6N2E2_4032	0.21	+0.5
4,706,839	-		Pf6N2E2_4032	0.21	-0.5
4,706,839	-		Pf6N2E2_4032	0.21	-0.0
4,706,839	-		Pf6N2E2_4032	0.21	-0.7
4,706,839	-		Pf6N2E2_4032	0.21	+1.0
4,706,839	-		Pf6N2E2_4032	0.21	+2.9
4,706,839	-		Pf6N2E2_4032	0.21	+0.8
4,706,913	+		Pf6N2E2_4032	0.57	+1.2
4,706,914	-		Pf6N2E2_4032	0.57	+1.2
4,706,922	+		Pf6N2E2_4032	0.61	+0.7
4,706,923	-		Pf6N2E2_4032	0.62	-0.1
4,706,923	-		Pf6N2E2_4032	0.62	+0.0
4,706,923	-		Pf6N2E2_4032	0.62	+0.7
4,707,006	+				+2.0
4,707,007	-				+1.4
4,707,007	-				-0.6
4,707,007	-				+0.7
4,707,007	-				-0.2
4,707,012	+				+2.0
4,707,012	+				+1.0
4,707,013	-				-1.2
4,707,171	+				+1.5
4,707,171	+				+1.4
4,707,171	+				+0.1
4,707,171	+				+1.0
4,707,244	+		Pf6N2E2_4033	0.12	+0.7
4,707,244	+		Pf6N2E2_4033	0.12	-0.6
4,707,244	+		Pf6N2E2_4033	0.12	+0.0
4,707,244	+		Pf6N2E2_4033	0.12	+0.1
4,707,244	+		Pf6N2E2_4033	0.12	+0.3
4,707,244	+		Pf6N2E2_4033	0.12	+0.5
4,707,245	-		Pf6N2E2_4033	0.12	+0.9
4,707,245	-		Pf6N2E2_4033	0.12	+0.3
4,707,245	-		Pf6N2E2_4033	0.12	+0.3
4,707,245	-		Pf6N2E2_4033	0.12	+0.7
4,707,245	-		Pf6N2E2_4033	0.12	-0.2
4,707,245	-		Pf6N2E2_4033	0.12	+1.3
4,707,637	-		Pf6N2E2_4033	0.39	+1.0
4,707,744	+		Pf6N2E2_4033	0.46	+0.1
4,707,744	+		Pf6N2E2_4033	0.46	+1.0
4,707,745	-		Pf6N2E2_4033	0.46	-0.2