Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3937

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,573,349	-		Pf6N2E2_3936	0.32	+0.9
4,573,434	+		Pf6N2E2_3936	0.41	+0.7
4,573,434	+		Pf6N2E2_3936	0.41	+1.7
4,573,434	+		Pf6N2E2_3936	0.41	+0.8
4,573,434	+		Pf6N2E2_3936	0.41	-0.5
4,573,434	+		Pf6N2E2_3936	0.41	+0.7
4,573,434	+		Pf6N2E2_3936	0.41	+0.5
4,573,434	+		Pf6N2E2_3936	0.41	+0.8
4,573,434	+		Pf6N2E2_3936	0.41	-1.1
4,573,434	+		Pf6N2E2_3936	0.41	-1.6
4,573,434	+		Pf6N2E2_3936	0.41	+1.0
4,573,434	+		Pf6N2E2_3936	0.41	+0.4
4,573,434	+		Pf6N2E2_3936	0.41	-0.3
4,573,435	-		Pf6N2E2_3936	0.41	-1.4
4,573,435	-		Pf6N2E2_3936	0.41	+0.3
4,573,435	-		Pf6N2E2_3936	0.41	+0.7
4,573,435	-		Pf6N2E2_3936	0.41	-3.2
4,573,435	-		Pf6N2E2_3936	0.41	+0.1
4,573,435	-		Pf6N2E2_3936	0.41	+0.8
4,573,435	-		Pf6N2E2_3936	0.41	+0.8
4,573,435	-		Pf6N2E2_3936	0.41	-0.7
4,573,435	-		Pf6N2E2_3936	0.41	+0.9
4,573,435	-		Pf6N2E2_3936	0.41	+0.9
4,573,435	-		Pf6N2E2_3936	0.41	-0.7
4,573,435	-		Pf6N2E2_3936	0.41	-0.9
4,573,435	-		Pf6N2E2_3936	0.41	-0.1
4,573,435	-		Pf6N2E2_3936	0.41	-0.7
4,573,435	-		Pf6N2E2_3936	0.41	+1.4
4,573,435	-		Pf6N2E2_3936	0.41	-1.3
4,573,435	-		Pf6N2E2_3936	0.41	-0.1
4,573,526	-		Pf6N2E2_3936	0.51	-0.3
4,573,576	-		Pf6N2E2_3936	0.56	-0.8
4,573,585	+		Pf6N2E2_3936	0.57	+1.1
4,573,632	+		Pf6N2E2_3936	0.62	-0.7
4,573,632	+		Pf6N2E2_3936	0.62	+0.5
4,573,633	-		Pf6N2E2_3936	0.63	+0.2
4,573,674	+		Pf6N2E2_3936	0.67	+0.5
4,573,675	-		Pf6N2E2_3936	0.67	+0.1
4,573,746	+		Pf6N2E2_3936	0.75	-1.2
4,573,746	+		Pf6N2E2_3936	0.75	+1.4
4,573,746	+		Pf6N2E2_3936	0.75	-1.0
4,573,769	-		Pf6N2E2_3936	0.77	-0.2
4,573,769	-		Pf6N2E2_3936	0.77	+1.0
4,573,769	-		Pf6N2E2_3936	0.77	+0.3
4,573,769	-		Pf6N2E2_3936	0.77	+0.4
4,573,769	-		Pf6N2E2_3936	0.77	+0.4
4,573,769	-		Pf6N2E2_3936	0.77	-0.3
4,573,769	-		Pf6N2E2_3936	0.77	+1.0
4,573,920	+				-1.2
4,573,921	-				-0.4
4,573,921	-				-1.1
4,573,921	-				+0.6
4,573,947	+				-0.4
4,573,947	+				+0.2
4,573,947	+				+0.7
4,573,947	+				+0.2
4,573,948	-				+0.3
4,573,948	-				-2.0
4,573,948	-				+0.3
4,573,948	-				+2.1
4,573,948	-				+0.1
4,573,948	-				+0.3
4,573,951	+				+0.5
4,573,951	+				+0.4
4,573,952	-				-1.7
4,573,952	-				+1.0
4,573,952	-				-1.1
4,573,952	-				+0.5
4,573,952	-				+0.7
4,573,952	-				+1.1
4,573,974	+				+0.5
4,573,974	+				-2.2
4,573,974	+				-0.1
4,573,974	+				+0.2
4,573,975	-				+0.8
4,573,975	-				+0.6
4,573,975	-				+0.0
4,573,975	-				+0.1
4,573,975	-				+0.4
4,573,975	-				+1.6
4,573,975	-				+0.0
4,573,975	-				+1.9
4,573,975	-				-1.1
4,573,975	-				-1.1
4,573,975	-				-0.5
4,573,975	-				-0.2
4,573,978	+				+0.2
4,573,978	+				+0.7
4,573,979	-				-0.1
4,573,979	-				+0.6
4,573,979	-				+0.5
4,573,979	-				+0.9
4,574,840	-				-0.4
4,574,856	-				-0.1
4,574,856	-				-0.3
4,574,856	-				-0.5
4,574,856	-				+0.6
4,574,856	-				-0.5
4,574,858	-				-0.3
4,574,858	-				+0.6
4,574,897	-				-0.1
4,574,897	-				+0.5
4,574,963	+				+2.3
4,574,963	+				+0.5
4,574,963	+				+1.5
4,574,964	-				+1.1
4,574,964	-				+0.6
4,574,964	-				+0.5
4,574,993	+				+0.3
4,575,116	+		Pf6N2E2_3938	0.11	-0.1
4,575,116	+		Pf6N2E2_3938	0.11	+0.2
4,575,116	+		Pf6N2E2_3938	0.11	+2.2
4,575,116	+		Pf6N2E2_3938	0.11	-0.5
4,575,116	+		Pf6N2E2_3938	0.11	+0.6
4,575,117	-		Pf6N2E2_3938	0.11	+0.5
4,575,117	-		Pf6N2E2_3938	0.11	+0.1
4,575,117	-		Pf6N2E2_3938	0.11	+0.7
4,575,117	-		Pf6N2E2_3938	0.11	-0.3
4,575,216	+		Pf6N2E2_3938	0.17	+0.6
4,575,217	-		Pf6N2E2_3938	0.18	-0.5
4,575,217	-		Pf6N2E2_3938	0.18	-1.1
4,575,217	-		Pf6N2E2_3938	0.18	+0.1
4,575,338	+		Pf6N2E2_3938	0.26	-0.1
4,575,339	-		Pf6N2E2_3938	0.26	-0.7
4,575,368	+		Pf6N2E2_3938	0.28	+1.1
4,575,368	+		Pf6N2E2_3938	0.28	-0.2
4,575,369	-		Pf6N2E2_3938	0.28	-1.2
4,575,369	-		Pf6N2E2_3938	0.28	+0.2
4,575,374	+		Pf6N2E2_3938	0.28	+1.4
4,575,374	+		Pf6N2E2_3938	0.28	+0.1
4,575,374	+		Pf6N2E2_3938	0.28	+0.7
4,575,374	+		Pf6N2E2_3938	0.28	-0.7
4,575,374	+		Pf6N2E2_3938	0.28	-0.4
4,575,374	+		Pf6N2E2_3938	0.28	+0.4
4,575,374	+		Pf6N2E2_3938	0.28	-1.4
4,575,375	-		Pf6N2E2_3938	0.28	-1.4
4,575,375	-		Pf6N2E2_3938	0.28	+0.4
4,575,375	-		Pf6N2E2_3938	0.28	+0.5
4,575,375	-		Pf6N2E2_3938	0.28	+1.2
4,575,375	-		Pf6N2E2_3938	0.28	+0.3
4,575,386	+		Pf6N2E2_3938	0.29	+0.4
4,575,516	-		Pf6N2E2_3938	0.37	-0.3
4,575,524	+		Pf6N2E2_3938	0.38	+0.8
4,575,525	-		Pf6N2E2_3938	0.38	+0.0
4,575,609	+		Pf6N2E2_3938	0.43	-0.0
4,575,692	+		Pf6N2E2_3938	0.49	+0.3
4,575,692	+		Pf6N2E2_3938	0.49	+0.1
4,575,692	+		Pf6N2E2_3938	0.49	-0.6
4,575,692	+		Pf6N2E2_3938	0.49	-0.3
4,575,692	+		Pf6N2E2_3938	0.49	+0.0
4,575,692	+		Pf6N2E2_3938	0.49	-1.8
4,575,692	+		Pf6N2E2_3938	0.49	+0.6
4,575,692	+		Pf6N2E2_3938	0.49	-0.5
4,575,692	+		Pf6N2E2_3938	0.49	+0.1
4,575,692	+		Pf6N2E2_3938	0.49	+0.7
4,575,693	-		Pf6N2E2_3938	0.49	+0.3
4,575,693	-		Pf6N2E2_3938	0.49	+0.3
4,575,693	-		Pf6N2E2_3938	0.49	+0.3
4,575,693	-		Pf6N2E2_3938	0.49	-0.5
4,575,693	-		Pf6N2E2_3938	0.49	+0.3
4,575,749	-		Pf6N2E2_3938	0.53	+1.5
4,575,749	-		Pf6N2E2_3938	0.53	+1.0