Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3825

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,459,049	+		Pf6N2E2_3824	0.10	-1.3
4,459,049	+		Pf6N2E2_3824	0.10	-0.4
4,459,049	+		Pf6N2E2_3824	0.10	+0.6
4,459,049	+		Pf6N2E2_3824	0.10	-1.7
4,459,049	+		Pf6N2E2_3824	0.10	+0.3
4,459,049	+		Pf6N2E2_3824	0.10	+0.6
4,459,049	+		Pf6N2E2_3824	0.10	+1.0
4,459,049	+		Pf6N2E2_3824	0.10	-0.2
4,459,050	-		Pf6N2E2_3824	0.10	+0.2
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	-0.0
4,459,050	-		Pf6N2E2_3824	0.10	-0.2
4,459,050	-		Pf6N2E2_3824	0.10	-0.2
4,459,050	-		Pf6N2E2_3824	0.10	-0.0
4,459,050	-		Pf6N2E2_3824	0.10	+0.2
4,459,050	-		Pf6N2E2_3824	0.10	-0.9
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	+0.1
4,459,050	-		Pf6N2E2_3824	0.10	+0.2
4,459,050	-		Pf6N2E2_3824	0.10	+0.6
4,459,051	+		Pf6N2E2_3824	0.10	-0.7
4,459,051	+		Pf6N2E2_3824	0.10	+1.2
4,459,051	+		Pf6N2E2_3824	0.10	-0.1
4,459,051	+		Pf6N2E2_3824	0.10	-1.0
4,459,051	+		Pf6N2E2_3824	0.10	+0.1
4,459,052	-		Pf6N2E2_3824	0.11	+0.4
4,459,052	-		Pf6N2E2_3824	0.11	-0.9
4,459,052	-		Pf6N2E2_3824	0.11	+0.3
4,459,052	-		Pf6N2E2_3824	0.11	+0.4
4,459,052	-		Pf6N2E2_3824	0.11	-0.7
4,459,055	+		Pf6N2E2_3824	0.11	+0.7
4,459,055	+		Pf6N2E2_3824	0.11	+0.2
4,459,055	+		Pf6N2E2_3824	0.11	+1.7
4,459,055	+		Pf6N2E2_3824	0.11	+0.6
4,459,055	+		Pf6N2E2_3824	0.11	+0.7
4,459,055	+		Pf6N2E2_3824	0.11	-1.0
4,459,055	+		Pf6N2E2_3824	0.11	+2.2
4,459,055	+		Pf6N2E2_3824	0.11	-0.5
4,459,056	-		Pf6N2E2_3824	0.11	-0.2
4,459,056	-		Pf6N2E2_3824	0.11	+0.4
4,459,056	-		Pf6N2E2_3824	0.11	+0.4
4,459,056	-		Pf6N2E2_3824	0.11	-0.6
4,459,119	+		Pf6N2E2_3824	0.21	-0.2
4,459,119	+		Pf6N2E2_3824	0.21	+0.1
4,459,119	+		Pf6N2E2_3824	0.21	-0.3
4,459,120	-		Pf6N2E2_3824	0.21	+0.4
4,459,120	-		Pf6N2E2_3824	0.21	+0.9
4,459,120	-		Pf6N2E2_3824	0.21	-0.8
4,459,120	-		Pf6N2E2_3824	0.21	+0.0
4,459,420	-		Pf6N2E2_3824	0.70	+0.3
4,459,477	+		Pf6N2E2_3824	0.79	+0.7
4,459,477	+		Pf6N2E2_3824	0.79	+0.2
4,459,478	-		Pf6N2E2_3824	0.79	+1.5
4,459,631	-				-0.1
4,459,631	-				+0.6
4,459,633	-				-0.2
4,459,796	-				+0.1
4,459,806	+				+0.7
4,459,806	+				+1.8
4,459,843	+				-0.6
4,459,844	-				+0.3
4,459,844	-				-0.7
4,459,844	-				-0.9
4,459,844	-				-0.1
4,459,873	-				+0.5
4,459,883	+				-0.6
4,459,883	+				+0.9
4,459,883	+				-0.1
4,459,884	-				-0.2
4,459,884	-				-0.0
4,459,951	+				-1.7
4,460,143	+		Pf6N2E2_3825	0.26	-1.6
4,460,144	-		Pf6N2E2_3825	0.26	-0.4
4,460,221	-		Pf6N2E2_3825	0.33	-1.3
4,460,372	-		Pf6N2E2_3825	0.47	-1.7
4,460,372	-		Pf6N2E2_3825	0.47	-1.2
4,460,542	+		Pf6N2E2_3825	0.62	+0.9
4,460,542	+		Pf6N2E2_3825	0.62	-1.3
4,460,543	-		Pf6N2E2_3825	0.63	-2.3
4,460,955	-				+0.8
4,461,228	+		Pf6N2E2_3826	0.20	-0.8
4,461,250	-		Pf6N2E2_3826	0.21	+1.2
4,461,250	-		Pf6N2E2_3826	0.21	-1.8
4,461,733	-		Pf6N2E2_3826	0.55	-1.2
4,461,869	+		Pf6N2E2_3826	0.64	-0.2
4,461,870	-		Pf6N2E2_3826	0.64	-1.1
4,461,870	-		Pf6N2E2_3826	0.64	+0.2