Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_38

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
76,438	+		Pf6N2E2_36	0.80	+0.8
76,438	+		Pf6N2E2_36	0.80	-0.3
76,438	+		Pf6N2E2_36	0.80	+0.3
76,438	+		Pf6N2E2_36	0.80	-0.3
76,438	+		Pf6N2E2_36	0.80	-0.4
76,438	+		Pf6N2E2_36	0.80	-1.0
76,438	+		Pf6N2E2_36	0.80	+0.1
76,438	+		Pf6N2E2_36	0.80	+0.5
76,439	-		Pf6N2E2_36	0.80	+0.7
76,439	-		Pf6N2E2_36	0.80	-0.8
76,439	-		Pf6N2E2_36	0.80	+1.9
76,439	-		Pf6N2E2_36	0.80	-0.4
76,439	-		Pf6N2E2_36	0.80	+0.9
76,439	-		Pf6N2E2_36	0.80	+0.1
76,439	-		Pf6N2E2_36	0.80	-0.5
76,439	-		Pf6N2E2_36	0.80	-0.5
76,489	+		Pf6N2E2_36	0.86	+0.6
76,489	+		Pf6N2E2_36	0.86	+1.0
76,489	+		Pf6N2E2_36	0.86	-0.1
76,490	-		Pf6N2E2_36	0.86	+0.3
76,490	-		Pf6N2E2_36	0.86	-1.4
76,576	+				-0.1
76,577	-				+0.3
76,577	-				-2.7
76,644	+				+0.7
76,645	-				-0.2
76,645	-				-0.4
76,739	+				+0.2
76,739	+				-0.6
76,740	-				-0.3
76,851	+				+2.5
76,851	+				+2.7
76,852	-				+3.0
76,852	-				+2.7
76,852	-				+2.6
76,852	-				+2.3
76,852	-				+1.5
76,986	+		Pf6N2E2_37	0.41	+3.3
76,986	+		Pf6N2E2_37	0.41	+3.0
76,986	+		Pf6N2E2_37	0.41	+4.1
76,986	+		Pf6N2E2_37	0.41	+1.9
76,987	-		Pf6N2E2_37	0.42	-0.1
76,987	-		Pf6N2E2_37	0.42	+2.4
76,987	-		Pf6N2E2_37	0.42	+2.3
77,007	+		Pf6N2E2_37	0.47	+2.2
77,209	+				+3.1
77,209	+				+2.5
77,210	-				-1.0
77,242	+				+2.1
77,243	-				-1.7
77,280	-				-0.2
77,376	-				+1.1
77,422	-		Pf6N2E2_38	0.13	+0.1
77,459	+		Pf6N2E2_38	0.17	+0.2
77,460	-		Pf6N2E2_38	0.17	+0.1
77,597	+		Pf6N2E2_38	0.30	+0.6
77,598	-		Pf6N2E2_38	0.30	-0.1
77,616	-		Pf6N2E2_38	0.31	+0.6
77,639	+		Pf6N2E2_38	0.33	+1.0
78,065	+		Pf6N2E2_38	0.73	-0.7
78,065	+		Pf6N2E2_38	0.73	-0.4
78,065	+		Pf6N2E2_38	0.73	-0.0
78,065	+		Pf6N2E2_38	0.73	-1.0
78,065	+		Pf6N2E2_38	0.73	-1.3
78,065	+		Pf6N2E2_38	0.73	-0.2
78,065	+		Pf6N2E2_38	0.73	-1.0
78,066	-		Pf6N2E2_38	0.73	+1.1
78,066	-		Pf6N2E2_38	0.73	+1.1
78,066	-		Pf6N2E2_38	0.73	-1.3
78,388	+				-0.1
78,389	-				-0.5
78,389	-				-0.1
78,389	-				+0.9
78,390	+				+0.9
78,391	-				-0.1
78,409	+				-0.5
78,410	-				+2.1
78,410	-				+0.2
78,410	-				+0.1
78,410	-				-0.1
78,482	+				-0.1
78,483	-				+1.2
78,483	-				+0.5
78,484	+				-2.1
78,484	+				+0.0
78,484	+				+0.3
78,485	-				-0.6
78,485	-				+0.9
78,485	-				+0.9
78,485	-				+1.1
78,485	-				+0.1
78,485	-				-0.9
78,485	-				+0.1
78,495	+				+0.6
78,611	+		Pf6N2E2_39	0.36	-0.4
78,708	+		Pf6N2E2_39	0.67	+2.2
78,708	+		Pf6N2E2_39	0.67	+0.6
78,709	-		Pf6N2E2_39	0.67	-0.6
78,709	-		Pf6N2E2_39	0.67	+2.3
78,714	+		Pf6N2E2_39	0.69	-2.0
78,714	+		Pf6N2E2_39	0.69	+1.6
78,715	-		Pf6N2E2_39	0.69	+1.2
78,715	-		Pf6N2E2_39	0.69	+0.4
78,735	-		Pf6N2E2_39	0.76	+1.0
78,804	-				-0.5
78,807	+				+0.5
78,808	-				+0.7
78,808	-				+0.3
78,833	-				+0.5
79,023	-		Pf6N2E2_40	0.69	+1.1
79,023	-		Pf6N2E2_40	0.69	+1.1
79,023	-		Pf6N2E2_40	0.69	-0.1
79,025	-		Pf6N2E2_40	0.69	+1.8
79,025	-		Pf6N2E2_40	0.69	+1.2
79,025	-		Pf6N2E2_40	0.69	+0.9
79,029	-		Pf6N2E2_40	0.71	+0.4
79,099	-				+0.2
79,108	+				+0.0
79,109	-				-0.0
79,230	-		Pf6N2E2_41	0.16	+0.1
79,232	-		Pf6N2E2_41	0.17	-1.5
79,252	+		Pf6N2E2_41	0.20	+1.3
79,253	-		Pf6N2E2_41	0.20	-0.1