Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3753

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,372,293	-		Pf6N2E2_3752	0.86	+0.1
4,372,293	-		Pf6N2E2_3752	0.86	-0.8
4,372,331	+		Pf6N2E2_3752	0.87	-0.2
4,372,331	+		Pf6N2E2_3752	0.87	-1.4
4,372,331	+		Pf6N2E2_3752	0.87	-1.2
4,372,331	+		Pf6N2E2_3752	0.87	-1.2
4,372,331	+		Pf6N2E2_3752	0.87	-1.1
4,372,331	+		Pf6N2E2_3752	0.87	-0.1
4,372,331	+		Pf6N2E2_3752	0.87	+0.5
4,372,331	+		Pf6N2E2_3752	0.87	-1.7
4,372,331	+		Pf6N2E2_3752	0.87	-1.0
4,372,331	+		Pf6N2E2_3752	0.87	-0.9
4,372,331	+		Pf6N2E2_3752	0.87	-0.3
4,372,332	-		Pf6N2E2_3752	0.87	-0.1
4,372,364	+		Pf6N2E2_3752	0.88	-1.3
4,372,364	+		Pf6N2E2_3752	0.88	+0.2
4,372,364	+		Pf6N2E2_3752	0.88	-3.5
4,372,364	+		Pf6N2E2_3752	0.88	-2.5
4,372,364	+		Pf6N2E2_3752	0.88	+0.5
4,372,364	+		Pf6N2E2_3752	0.88	-0.6
4,372,365	-		Pf6N2E2_3752	0.88	-1.1
4,372,365	-		Pf6N2E2_3752	0.88	+0.1
4,372,365	-		Pf6N2E2_3752	0.88	+0.1
4,372,365	-		Pf6N2E2_3752	0.88	-0.8
4,372,365	-		Pf6N2E2_3752	0.88	-0.5
4,372,643	+				+0.7
4,372,644	-				-0.3
4,372,830	+				-1.0
4,372,830	+				+0.1
4,372,830	+				+0.3
4,372,830	+				-1.7
4,372,830	+				+0.3
4,372,830	+				-1.9
4,372,830	+				-0.8
4,372,831	-				-0.5
4,372,831	-				-0.9
4,372,837	+				-1.9
4,372,838	-				+0.3
4,372,838	-				+0.2
4,372,838	-				-0.3
4,372,857	+				-0.7
4,372,858	-				+0.5
4,372,858	-				-0.8
4,372,858	-				+0.3
4,372,858	-				+0.8
4,372,880	+				+0.7
4,372,881	-				-0.5
4,372,896	+				+0.8
4,373,010	+				-0.2
4,373,010	+				-0.4
4,373,011	-				+0.2
4,373,011	-				+0.4
4,373,011	-				-0.6
4,373,011	-				+0.7
4,373,088	+				+0.9
4,373,089	-				-1.0
4,373,128	+				+0.5
4,373,142	+				-1.2
4,373,142	+				-1.0
4,373,142	+				-1.2
4,373,143	-				-0.5
4,373,143	-				-0.2
4,373,374	+				-1.0
4,373,374	+				-1.2
4,373,374	+				-3.6
4,373,374	+				+0.3
4,373,375	-				-1.1
4,373,375	-				-1.8
4,373,375	-				-2.1
4,373,375	-				-1.9
4,373,386	+				-1.2
4,373,386	+				-2.6
4,373,386	+				-2.7
4,373,386	+				-0.8
4,373,386	+				-1.5
4,373,387	-				-3.7
4,373,387	-				-0.7
4,373,387	-				-1.7
4,373,387	-				-0.8
4,373,387	-				-1.1
4,373,419	+		Pf6N2E2_3753	0.11	-3.1
4,373,419	+		Pf6N2E2_3753	0.11	-1.9
4,373,419	+		Pf6N2E2_3753	0.11	-1.9
4,373,420	-		Pf6N2E2_3753	0.11	-1.0
4,373,425	+		Pf6N2E2_3753	0.11	-0.5
4,373,425	+		Pf6N2E2_3753	0.11	-2.8
4,373,493	+		Pf6N2E2_3753	0.16	-1.5
4,373,493	+		Pf6N2E2_3753	0.16	-1.5
4,373,493	+		Pf6N2E2_3753	0.16	-1.0
4,373,494	-		Pf6N2E2_3753	0.16	-1.1
4,373,494	-		Pf6N2E2_3753	0.16	-1.9
4,373,497	+		Pf6N2E2_3753	0.16	-1.9
4,373,497	+		Pf6N2E2_3753	0.16	-4.1
4,373,497	+		Pf6N2E2_3753	0.16	-1.9
4,373,497	+		Pf6N2E2_3753	0.16	-1.7
4,373,497	+		Pf6N2E2_3753	0.16	-1.9
4,373,497	+		Pf6N2E2_3753	0.16	-0.8
4,373,497	+		Pf6N2E2_3753	0.16	-1.6
4,373,497	+		Pf6N2E2_3753	0.16	-1.5
4,373,497	+		Pf6N2E2_3753	0.16	-3.1
4,373,497	+		Pf6N2E2_3753	0.16	-1.3
4,373,497	+		Pf6N2E2_3753	0.16	-3.6
4,373,498	-		Pf6N2E2_3753	0.16	-2.5
4,373,498	-		Pf6N2E2_3753	0.16	-2.0
4,373,498	-		Pf6N2E2_3753	0.16	-2.1
4,373,498	-		Pf6N2E2_3753	0.16	-1.5
4,373,498	-		Pf6N2E2_3753	0.16	-1.7
4,373,498	-		Pf6N2E2_3753	0.16	-3.0
4,373,521	+		Pf6N2E2_3753	0.17	-2.1
4,373,522	-		Pf6N2E2_3753	0.17	-2.2
4,373,522	-		Pf6N2E2_3753	0.17	-1.5
4,374,036	+		Pf6N2E2_3753	0.50	-3.1
4,374,036	+		Pf6N2E2_3753	0.50	-3.0
4,374,036	+		Pf6N2E2_3753	0.50	-2.0
4,374,036	+		Pf6N2E2_3753	0.50	-1.6
4,374,036	+		Pf6N2E2_3753	0.50	-0.7
4,374,036	+		Pf6N2E2_3753	0.50	-1.7
4,374,036	+		Pf6N2E2_3753	0.50	-1.7
4,374,036	+		Pf6N2E2_3753	0.50	-2.7
4,374,036	+		Pf6N2E2_3753	0.50	-3.6
4,374,037	-		Pf6N2E2_3753	0.50	-2.5
4,374,037	-		Pf6N2E2_3753	0.50	-0.5
4,374,037	-		Pf6N2E2_3753	0.50	-2.2
4,374,037	-		Pf6N2E2_3753	0.50	-2.0
4,374,037	-		Pf6N2E2_3753	0.50	-1.7
4,374,037	-		Pf6N2E2_3753	0.50	-3.9
4,374,065	+		Pf6N2E2_3753	0.52	-2.1
4,374,065	+		Pf6N2E2_3753	0.52	-1.4
4,374,066	-		Pf6N2E2_3753	0.52	-1.1
4,374,066	-		Pf6N2E2_3753	0.52	-2.1
4,374,066	-		Pf6N2E2_3753	0.52	-1.8
4,374,238	+		Pf6N2E2_3753	0.63	-2.4
4,374,238	+		Pf6N2E2_3753	0.63	-1.9
4,374,238	+		Pf6N2E2_3753	0.63	-2.3
4,374,239	-		Pf6N2E2_3753	0.63	-3.2
4,374,239	-		Pf6N2E2_3753	0.63	-2.0
4,374,262	+		Pf6N2E2_3753	0.64	-2.0
4,374,262	+		Pf6N2E2_3753	0.64	-1.7
4,374,262	+		Pf6N2E2_3753	0.64	-2.1
4,374,262	+		Pf6N2E2_3753	0.64	-1.7
4,374,262	+		Pf6N2E2_3753	0.64	-4.3
4,374,263	-		Pf6N2E2_3753	0.64	-2.0
4,374,263	-		Pf6N2E2_3753	0.64	-1.8
4,374,263	-		Pf6N2E2_3753	0.64	-1.1
4,374,445	+		Pf6N2E2_3753	0.76	-1.4
4,374,445	+		Pf6N2E2_3753	0.76	-3.9
4,374,445	+		Pf6N2E2_3753	0.76	-2.6
4,374,446	-		Pf6N2E2_3753	0.76	-3.9
4,374,446	-		Pf6N2E2_3753	0.76	-1.7
4,374,446	-		Pf6N2E2_3753	0.76	-1.9
4,374,446	-		Pf6N2E2_3753	0.76	-0.9
4,374,446	-		Pf6N2E2_3753	0.76	-1.5
4,374,543	+		Pf6N2E2_3753	0.82	-1.9
4,374,544	-		Pf6N2E2_3753	0.82	-1.1
4,374,544	-		Pf6N2E2_3753	0.82	+0.5
4,374,544	-		Pf6N2E2_3753	0.82	-0.5
4,374,544	-		Pf6N2E2_3753	0.82	-3.4
4,374,821	+				-1.1
4,374,821	+				-3.1
4,374,822	-				-2.4
4,374,822	-				-1.7
4,374,822	-				-2.9
4,374,822	-				-1.1
4,374,822	-				-1.3
4,374,822	-				-3.1
4,374,835	+				-2.7
4,374,835	+				-1.5
4,374,835	+				-1.8
4,374,836	-				-2.2
4,374,836	-				-1.8
4,374,836	-				-0.8
4,374,845	+				-1.4
4,374,846	-				-0.2
4,374,846	-				-0.2