Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3672

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,273,908	-		Pf6N2E2_3671	0.57	-1.6
4,274,355	-				-2.3
4,274,355	-				+1.9
4,274,383	-				+2.6
4,274,439	-				+0.6
4,274,439	-				+0.8
4,274,439	-				+0.6
4,274,439	-				+2.1
4,274,439	-				+1.9
4,274,535	-				+1.8
4,274,535	-				+1.0
4,274,668	-				+2.7
4,274,668	-				+1.4
4,274,668	-				+1.9
4,274,668	-				+2.8
4,275,168	+		Pf6N2E2_3672	0.21	+0.1
4,275,168	+		Pf6N2E2_3672	0.21	+1.2
4,275,168	+		Pf6N2E2_3672	0.21	+1.4
4,275,168	+		Pf6N2E2_3672	0.21	+0.1
4,275,169	-		Pf6N2E2_3672	0.21	+3.5
4,275,169	-		Pf6N2E2_3672	0.21	+2.9
4,275,169	-		Pf6N2E2_3672	0.21	+2.3
4,275,361	+		Pf6N2E2_3672	0.28	-0.1
4,275,362	-				+3.6
4,275,483	+		Pf6N2E2_3672	0.32	+1.1
4,275,483	+		Pf6N2E2_3672	0.32	+0.4
4,275,483	+		Pf6N2E2_3672	0.32	+2.2
4,275,796	-		Pf6N2E2_3672	0.43	+3.3
4,275,796	-		Pf6N2E2_3672	0.43	+3.8
4,276,159	-		Pf6N2E2_3672	0.55	+1.9
4,276,159	-		Pf6N2E2_3672	0.55	+2.1
4,276,159	-		Pf6N2E2_3672	0.55	+3.2
4,276,289	-		Pf6N2E2_3672	0.59	+3.0
4,276,289	-		Pf6N2E2_3672	0.59	+3.0
4,276,290	+		Pf6N2E2_3672	0.59	+0.6
4,276,290	+		Pf6N2E2_3672	0.59	+1.2
4,276,291	-		Pf6N2E2_3672	0.59	+2.4
4,276,306	-		Pf6N2E2_3672	0.60	+4.2
4,276,344	+		Pf6N2E2_3672	0.61	-0.3
4,276,344	+		Pf6N2E2_3672	0.61	+1.3
4,276,576	-		Pf6N2E2_3672	0.69	+3.0
4,276,686	+		Pf6N2E2_3672	0.73	+0.6
4,276,687	-		Pf6N2E2_3672	0.73	+2.6
4,276,687	-		Pf6N2E2_3672	0.73	+2.8
4,276,689	+		Pf6N2E2_3672	0.73	+2.7
4,276,689	+		Pf6N2E2_3672	0.73	+1.5
4,276,690	-		Pf6N2E2_3672	0.73	+1.3
4,276,690	-		Pf6N2E2_3672	0.73	+3.5
4,276,690	-		Pf6N2E2_3672	0.73	+4.6
4,276,690	-		Pf6N2E2_3672	0.73	+2.7
4,277,022	+		Pf6N2E2_3672	0.84	-0.1
4,277,022	+		Pf6N2E2_3672	0.84	+1.3
4,277,023	-		Pf6N2E2_3672	0.84	+3.7
4,277,023	-		Pf6N2E2_3672	0.84	+3.2
4,277,023	-		Pf6N2E2_3672	0.84	+3.0
4,277,023	-		Pf6N2E2_3672	0.84	+2.4
4,277,034	+		Pf6N2E2_3672	0.84	+3.0
4,277,240	-				+2.9
4,277,279	+				+0.2
4,277,330	-				+2.8
4,277,527	+				-1.5
4,277,543	+				+0.5
4,277,544	-				+1.9
4,277,549	-				+2.6
4,277,549	-				+3.2
4,277,717	+				+0.7
4,277,719	+				+1.9
4,277,719	+				+1.5
4,277,761	+				+1.6
4,278,225	+				+0.4