Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3663

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,263,493	+		Pf6N2E2_3661	0.45	+2.0
4,263,493	+		Pf6N2E2_3661	0.45	+6.2
4,263,494	-		Pf6N2E2_3661	0.45	+3.6
4,263,494	-		Pf6N2E2_3661	0.45	+4.4
4,263,494	-		Pf6N2E2_3661	0.45	+0.4
4,263,563	-		Pf6N2E2_3661	0.53	+2.7
4,263,601	+		Pf6N2E2_3661	0.57	+5.1
4,263,601	+		Pf6N2E2_3661	0.57	+5.8
4,263,601	+		Pf6N2E2_3661	0.57	+4.8
4,263,602	-		Pf6N2E2_3661	0.57	+1.9
4,263,608	+		Pf6N2E2_3661	0.58	+3.7
4,263,609	-		Pf6N2E2_3661	0.58	+4.7
4,263,609	-		Pf6N2E2_3661	0.58	+3.8
4,263,609	-		Pf6N2E2_3661	0.58	+4.3
4,263,702	-		Pf6N2E2_3661	0.69	+4.4
4,263,720	-		Pf6N2E2_3661	0.71	+4.0
4,263,806	+		Pf6N2E2_3661	0.81	+4.6
4,263,962	+				+5.4
4,263,963	-				+5.3
4,263,995	+				+3.2
4,263,998	-				+2.9
4,263,998	-				+3.2
4,264,426	+				+3.8
4,264,427	-				+6.7
4,264,427	-				+6.1
4,264,475	-				+7.8
4,264,475	-				+7.4
4,264,495	+		Pf6N2E2_3663	0.11	+5.0
4,264,496	-		Pf6N2E2_3663	0.12	+6.4
4,264,667	+		Pf6N2E2_3663	0.30	+3.4
4,264,668	-		Pf6N2E2_3663	0.31	+5.8
4,264,668	-		Pf6N2E2_3663	0.31	+6.7
4,264,669	+		Pf6N2E2_3663	0.31	+6.1
4,264,670	-		Pf6N2E2_3663	0.31	+7.8
4,264,670	-		Pf6N2E2_3663	0.31	+7.2
4,264,670	-		Pf6N2E2_3663	0.31	+6.3
4,264,670	-		Pf6N2E2_3663	0.31	+6.5
4,264,670	-		Pf6N2E2_3663	0.31	+7.0
4,264,670	-		Pf6N2E2_3663	0.31	+6.3
4,264,768	+		Pf6N2E2_3663	0.42	+5.3
4,264,844	-		Pf6N2E2_3663	0.50	+7.3
4,264,941	-		Pf6N2E2_3663	0.61	+6.8
4,265,032	+		Pf6N2E2_3663	0.71	+1.1
4,265,032	+		Pf6N2E2_3663	0.71	+5.0
4,265,033	-		Pf6N2E2_3663	0.71	+6.3
4,265,033	-		Pf6N2E2_3663	0.71	+7.0
4,265,033	-		Pf6N2E2_3663	0.71	+6.5
4,265,033	-		Pf6N2E2_3663	0.71	+8.0
4,265,033	-		Pf6N2E2_3663	0.71	+7.5
4,265,033	-		Pf6N2E2_3663	0.71	+7.2
4,265,033	-		Pf6N2E2_3663	0.71	+5.6
4,265,033	-		Pf6N2E2_3663	0.71	+7.8
4,265,033	-		Pf6N2E2_3663	0.71	+7.8
4,265,033	-		Pf6N2E2_3663	0.71	+5.2
4,265,063	+		Pf6N2E2_3663	0.74	+8.3
4,265,252	-				+7.2
4,265,252	-				+3.9
4,265,255	+				+4.8
4,265,255	+				+0.0
4,265,256	-				+6.6
4,265,256	-				+8.2
4,265,257	+				+5.1
4,265,257	+				+5.5
4,265,257	+				+3.8
4,265,258	-				+7.6
4,265,258	-				+8.6
4,265,258	-				+6.2
4,265,258	-				+6.2
4,265,258	-				+6.1
4,265,295	-				+5.6
4,265,478	-		Pf6N2E2_3664	0.11	-2.0
4,265,481	-		Pf6N2E2_3664	0.11	-4.1
4,265,906	+		Pf6N2E2_3664	0.35	+3.1
4,265,922	-		Pf6N2E2_3664	0.36	+3.7
4,265,969	+		Pf6N2E2_3664	0.39	+3.6
4,265,969	+		Pf6N2E2_3664	0.39	+3.2
4,265,969	+		Pf6N2E2_3664	0.39	+3.8
4,265,970	-		Pf6N2E2_3664	0.39	+3.5
4,265,970	-		Pf6N2E2_3664	0.39	+2.7
4,265,970	-		Pf6N2E2_3664	0.39	+4.1
4,265,970	-		Pf6N2E2_3664	0.39	-2.9
4,265,970	-		Pf6N2E2_3664	0.39	+3.8
4,265,970	-		Pf6N2E2_3664	0.39	+3.5
4,265,970	-		Pf6N2E2_3664	0.39	+4.7
4,265,970	-		Pf6N2E2_3664	0.39	+4.3
4,265,970	-		Pf6N2E2_3664	0.39	+4.4
4,265,970	-		Pf6N2E2_3664	0.39	+1.9
4,266,131	+		Pf6N2E2_3664	0.48	-1.2
4,266,131	+		Pf6N2E2_3664	0.48	-1.6
4,266,132	-		Pf6N2E2_3664	0.48	+3.0
4,266,198	-				+2.0
4,266,198	-		Pf6N2E2_3664	0.52	+3.7
4,266,198	-		Pf6N2E2_3664	0.52	+2.2
4,266,198	-		Pf6N2E2_3664	0.52	+3.0
4,266,198	-		Pf6N2E2_3664	0.52	+3.8
4,266,264	-		Pf6N2E2_3664	0.56	+4.4
4,266,264	-		Pf6N2E2_3664	0.56	+3.9
4,266,264	-		Pf6N2E2_3664	0.56	+3.8
4,266,264	-		Pf6N2E2_3664	0.56	+0.4
4,266,285	+		Pf6N2E2_3664	0.57	+1.3
4,266,286	-		Pf6N2E2_3664	0.57	+4.2
4,266,286	-		Pf6N2E2_3664	0.57	+4.0
4,266,288	-		Pf6N2E2_3664	0.57	+3.7