Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3642

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,240,393	+		Pf6N2E2_3640	0.84	-2.2
4,240,394	-		Pf6N2E2_3640	0.84	+1.4
4,240,394	-		Pf6N2E2_3640	0.84	-0.7
4,240,466	+				-0.6
4,240,592	-		Pf6N2E2_3641	0.22	+1.5
4,240,699	-		Pf6N2E2_3641	0.39	-0.1
4,240,699	-		Pf6N2E2_3641	0.39	-0.0
4,241,101	+				+0.9
4,241,101	+				+0.3
4,241,102	-				+0.6
4,241,102	-				-0.9
4,241,102	-				+0.4
4,241,204	+				+0.4
4,241,204	+				-0.7
4,241,205	-				-1.5
4,241,205	-				+0.3
4,241,205	-				-1.9
4,241,213	+				+0.4
4,241,213	+				-0.1
4,241,214	-				+0.6
4,241,367	+		Pf6N2E2_3642	0.10	-0.5
4,241,610	+		Pf6N2E2_3642	0.43	-0.7
4,241,611	-		Pf6N2E2_3642	0.43	-0.3
4,241,626	+		Pf6N2E2_3642	0.45	-0.9
4,241,627	-		Pf6N2E2_3642	0.45	-1.9
4,241,627	-		Pf6N2E2_3642	0.45	-0.8
4,241,627	-		Pf6N2E2_3642	0.45	-2.6
4,241,627	-		Pf6N2E2_3642	0.45	-0.5
4,241,670	+		Pf6N2E2_3642	0.51	-0.3
4,241,670	+		Pf6N2E2_3642	0.51	+0.1
4,241,671	-		Pf6N2E2_3642	0.51	-0.7
4,241,721	+		Pf6N2E2_3642	0.58	-1.2
4,241,925	+		Pf6N2E2_3642	0.85	-0.7
4,241,925	+		Pf6N2E2_3642	0.85	-1.4
4,241,926	-		Pf6N2E2_3642	0.85	-0.5
4,242,029	+				-0.8
4,242,128	+				-1.4
4,242,128	+				-0.6
4,242,128	+				+0.3
4,242,129	-				+1.1
4,242,181	+		Pf6N2E2_3643	0.14	-1.3
4,242,182	-		Pf6N2E2_3643	0.14	-0.2
4,242,184	+		Pf6N2E2_3643	0.14	-0.2
4,242,184	+		Pf6N2E2_3643	0.14	-0.5
4,242,185	-		Pf6N2E2_3643	0.14	+0.2
4,242,285	-		Pf6N2E2_3643	0.22	-0.0
4,242,478	+		Pf6N2E2_3643	0.37	-0.7
4,242,479	-		Pf6N2E2_3643	0.37	+1.4
4,242,479	-		Pf6N2E2_3643	0.37	+0.1
4,242,479	-		Pf6N2E2_3643	0.37	+0.2
4,242,479	-		Pf6N2E2_3643	0.37	-0.5
4,242,479	-		Pf6N2E2_3643	0.37	-0.2
4,242,522	-		Pf6N2E2_3643	0.40	-0.2
4,242,760	-		Pf6N2E2_3643	0.58	+1.3
4,242,760	-		Pf6N2E2_3643	0.58	-0.3
4,242,760	-		Pf6N2E2_3643	0.58	+0.4