Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3458

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,026,314	+		Pf6N2E2_3456	0.78	+0.6
4,026,314	+		Pf6N2E2_3456	0.78	+1.1
4,026,315	-		Pf6N2E2_3456	0.78	+1.4
4,026,315	-		Pf6N2E2_3456	0.78	-2.0
4,026,418	+		Pf6N2E2_3456	0.86	+1.0
4,026,418	+		Pf6N2E2_3456	0.86	-0.5
4,026,419	-		Pf6N2E2_3456	0.86	-1.2
4,026,460	+		Pf6N2E2_3456	0.89	+1.1
4,026,460	+		Pf6N2E2_3456	0.89	+1.3
4,026,461	-		Pf6N2E2_3456	0.89	-0.1
4,026,599	+				-1.0
4,026,828	+		Pf6N2E2_3457	0.41	+0.2
4,026,828	+		Pf6N2E2_3457	0.41	+0.8
4,026,828	+		Pf6N2E2_3457	0.41	-0.2
4,026,881	+		Pf6N2E2_3457	0.50	+0.8
4,026,936	+		Pf6N2E2_3457	0.60	+0.8
4,026,996	+		Pf6N2E2_3457	0.70	+0.7
4,026,996	+		Pf6N2E2_3457	0.70	+1.9
4,026,996	+		Pf6N2E2_3457	0.70	+0.4
4,027,079	+		Pf6N2E2_3457	0.84	+0.4
4,027,080	-		Pf6N2E2_3457	0.85	-1.6
4,027,080	-		Pf6N2E2_3457	0.85	-2.2
4,027,119	+				+0.3
4,027,119	+				+0.7
4,027,120	-				-3.6
4,027,120	-				-0.5
4,027,120	-				-1.7
4,027,186	+				-0.6
4,027,192	-				-1.2
4,027,192	-				-4.0
4,027,250	-				-1.4
4,027,250	-				-1.2
4,027,250	-				+0.9
4,027,250	-				-2.0
4,027,250	-				-1.0
4,028,280	-				-2.0