Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3137

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,627,744	+		Pf6N2E2_3136	0.73	+1.4
3,627,744	+		Pf6N2E2_3136	0.73	-0.9
3,627,744	+		Pf6N2E2_3136	0.73	+0.5
3,627,744	+		Pf6N2E2_3136	0.73	+1.5
3,627,744	+		Pf6N2E2_3136	0.73	+0.5
3,627,745	-		Pf6N2E2_3136	0.74	+0.2
3,627,745	-		Pf6N2E2_3136	0.74	-0.0
3,627,958	+				+0.9
3,628,013	+				+0.7
3,628,015	+				-0.4
3,628,015	+				-0.4
3,628,015	+				+0.4
3,628,015	+				-0.4
3,628,016	-				+1.0
3,628,016	-				-1.4
3,628,016	-				+0.5
3,628,016	-				+0.6
3,628,169	+				+0.2
3,628,177	-				+0.6
3,628,212	+				-0.6
3,628,213	-				+0.1
3,628,770	+				-0.8
3,628,770	+				+0.3
3,628,770	+				-0.5
3,628,771	-				-1.2
3,629,154	+		Pf6N2E2_3137	0.27	-0.5
3,629,154	+		Pf6N2E2_3137	0.27	-2.1
3,629,154	+		Pf6N2E2_3137	0.27	+0.0
3,629,290	-		Pf6N2E2_3137	0.35	-2.8
3,629,290	-		Pf6N2E2_3137	0.35	-0.2
3,629,290	-		Pf6N2E2_3137	0.35	-0.1
3,629,290	-		Pf6N2E2_3137	0.35	+0.2
3,629,570	-		Pf6N2E2_3137	0.51	+1.2
3,629,776	+		Pf6N2E2_3137	0.63	+0.3
3,629,776	+		Pf6N2E2_3137	0.63	-0.3
3,629,776	+		Pf6N2E2_3137	0.63	+0.7
3,629,777	-		Pf6N2E2_3137	0.63	-0.2
3,629,777	-		Pf6N2E2_3137	0.63	-1.0
3,629,784	+		Pf6N2E2_3137	0.64	+0.5
3,629,785	-		Pf6N2E2_3137	0.64	+0.9
3,629,785	-		Pf6N2E2_3137	0.64	-1.2
3,629,785	-		Pf6N2E2_3137	0.64	+0.2
3,629,785	-		Pf6N2E2_3137	0.64	+0.1
3,629,785	-		Pf6N2E2_3137	0.64	+1.5
3,629,829	+		Pf6N2E2_3137	0.66	+0.5
3,629,829	+		Pf6N2E2_3137	0.66	-0.4
3,629,829	+		Pf6N2E2_3137	0.66	+0.3
3,629,830	-		Pf6N2E2_3137	0.66	+0.1
3,629,830	-		Pf6N2E2_3137	0.66	-0.4
3,629,830	-		Pf6N2E2_3137	0.66	-1.8
3,629,830	-		Pf6N2E2_3137	0.66	-0.0
3,630,001	+		Pf6N2E2_3137	0.76	-0.1
3,630,002	-		Pf6N2E2_3137	0.76	+1.5
3,630,008	-		Pf6N2E2_3137	0.77	-0.2
3,630,081	+		Pf6N2E2_3137	0.81	-0.6
3,630,081	+		Pf6N2E2_3137	0.81	-2.4
3,630,082	-		Pf6N2E2_3137	0.81	+0.7
3,630,082	-		Pf6N2E2_3137	0.81	+0.1
3,630,105	+		Pf6N2E2_3137	0.82	-1.0
3,630,106	-		Pf6N2E2_3137	0.82	+2.0
3,630,106	-		Pf6N2E2_3137	0.82	-2.6
3,630,106	-		Pf6N2E2_3137	0.82	+0.1
3,630,330	+				+0.9
3,630,331	-				-0.7
3,630,398	+				+0.2
3,630,398	+				-0.4
3,630,398	+				-0.2
3,630,398	+				-1.4
3,630,398	+				-1.8
3,630,399	-				-0.7
3,630,399	-				-0.4
3,630,399	-				+1.6
3,630,957	-		Pf6N2E2_3138	0.72	-1.6
3,630,968	+		Pf6N2E2_3138	0.74	+0.3
3,630,969	-		Pf6N2E2_3138	0.74	-0.1
3,631,043	+		Pf6N2E2_3138	0.88	-0.3
3,631,043	+		Pf6N2E2_3138	0.88	+0.8
3,631,044	-		Pf6N2E2_3138	0.88	-0.6
3,631,044	-		Pf6N2E2_3138	0.88	-1.1
3,631,044	-		Pf6N2E2_3138	0.88	-1.3
3,631,044	-		Pf6N2E2_3138	0.88	-0.4
3,631,085	+				+1.4
3,631,085	+				+1.2
3,631,085	+				+0.6
3,631,123	+				+0.0
3,631,123	+				+0.3
3,631,123	+				+2.8
3,631,208	-				+0.8
3,631,212	+				-0.1
3,631,212	+				+0.2
3,631,212	+				-0.2
3,631,213	-				+1.1
3,631,213	-				+0.8
3,631,213	-				-0.1
3,631,222	+				-0.3