Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2973

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,464,263	-				-2.7
3,464,291	+				-1.9
3,464,291	+				-4.1
3,464,291	+				-2.9
3,464,291	+				-3.2
3,464,292	-				-3.1
3,464,292	-				-3.1
3,464,292	-				-4.2
3,464,292	-				-1.9
3,464,515	+		Pf6N2E2_2973	0.25	-2.2
3,464,525	-		Pf6N2E2_2973	0.27	-3.1
3,464,555	-		Pf6N2E2_2973	0.30	-2.8
3,464,665	+		Pf6N2E2_2973	0.41	-3.7
3,464,665	+		Pf6N2E2_2973	0.41	-2.7
3,464,665	+		Pf6N2E2_2973	0.41	-4.1
3,464,665	+		Pf6N2E2_2973	0.41	+0.1
3,464,666	-		Pf6N2E2_2973	0.41	-3.6
3,464,666	-		Pf6N2E2_2973	0.41	-3.2
3,464,666	-		Pf6N2E2_2973	0.41	-2.2
3,464,666	-		Pf6N2E2_2973	0.41	-3.7
3,465,023	-		Pf6N2E2_2973	0.79	-2.9
3,465,023	-		Pf6N2E2_2973	0.79	-1.9
3,465,314	+				+1.9
3,465,315	-				-1.0
3,465,315	-				-1.5
3,465,315	-				-1.8
3,465,316	+				-0.9
3,465,316	+				-0.7
3,465,316	+				+0.1
3,465,316	+				-0.9
3,465,317	-				-1.8
3,465,317	-				-0.1
3,465,317	-				-1.9
3,465,561	+		Pf6N2E2_2974	0.10	-0.2
3,465,561	+		Pf6N2E2_2974	0.10	-0.4
3,465,562	-		Pf6N2E2_2974	0.10	+0.3
3,465,562	-		Pf6N2E2_2974	0.10	+0.3
3,465,750	+		Pf6N2E2_2974	0.26	-1.7
3,465,750	+		Pf6N2E2_2974	0.26	-0.7
3,465,751	-		Pf6N2E2_2974	0.27	+0.3
3,465,751	-		Pf6N2E2_2974	0.27	+0.3
3,465,751	-		Pf6N2E2_2974	0.27	-1.0
3,465,751	-		Pf6N2E2_2974	0.27	+0.8
3,465,751	-		Pf6N2E2_2974	0.27	+0.3
3,466,180	-		Pf6N2E2_2974	0.63	+0.9
3,466,218	+		Pf6N2E2_2974	0.66	+0.3
3,466,219	-		Pf6N2E2_2974	0.66	+0.8
3,466,219	-		Pf6N2E2_2974	0.66	-0.3