Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2954

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,441,974	-				+0.7
3,441,974	-				+0.3
3,442,019	-				+1.7
3,442,019	-				+0.1
3,442,084	+		Pf6N2E2_2952	0.20	-0.3
3,442,085	-		Pf6N2E2_2952	0.20	+0.7
3,442,103	+		Pf6N2E2_2952	0.23	+1.4
3,442,103	+		Pf6N2E2_2952	0.23	+0.8
3,442,104	-		Pf6N2E2_2952	0.23	-1.7
3,442,104	-		Pf6N2E2_2952	0.23	+1.3
3,442,104	-		Pf6N2E2_2952	0.23	+0.2
3,442,410	+		Pf6N2E2_2952	0.78	-1.2
3,442,411	-		Pf6N2E2_2952	0.78	-0.0
3,442,411	-		Pf6N2E2_2952	0.78	+0.3
3,442,454	+		Pf6N2E2_2952	0.86	+0.5
3,442,454	+		Pf6N2E2_2952	0.86	-0.2
3,442,455	-		Pf6N2E2_2952	0.86	+0.3
3,442,524	+				-1.8
3,442,589	-		Pf6N2E2_2953	0.47	-0.0
3,442,651	+				+0.9
3,442,651	+				+1.2
3,442,651	+				+1.8
3,442,652	-				+0.6
3,442,652	-				+1.0
3,442,652	-				+0.2
3,442,652	-				+0.7
3,442,690	+				+0.1
3,442,691	-				+0.2
3,442,705	-				+0.9
3,442,705	-				+0.9
3,442,756	-				-1.0
3,442,973	-				-0.5
3,443,077	+		Pf6N2E2_2954	0.14	-0.1
3,443,077	+		Pf6N2E2_2954	0.14	+0.6
3,443,077	+		Pf6N2E2_2954	0.14	+0.1
3,443,077	+		Pf6N2E2_2954	0.14	+0.4
3,443,078	-		Pf6N2E2_2954	0.14	+0.5
3,443,119	+		Pf6N2E2_2954	0.16	-0.1
3,443,119	+		Pf6N2E2_2954	0.16	+1.0
3,443,119	+		Pf6N2E2_2954	0.16	-0.5
3,443,119	+		Pf6N2E2_2954	0.16	+0.5
3,443,120	-		Pf6N2E2_2954	0.16	+1.5
3,443,120	-		Pf6N2E2_2954	0.16	+1.7
3,443,120	-		Pf6N2E2_2954	0.16	-0.0
3,443,120	-		Pf6N2E2_2954	0.16	+0.6
3,443,120	-		Pf6N2E2_2954	0.16	+0.4
3,443,120	-		Pf6N2E2_2954	0.16	+0.5
3,443,120	-		Pf6N2E2_2954	0.16	+1.9
3,443,161	+		Pf6N2E2_2954	0.17	+0.3
3,443,162	-		Pf6N2E2_2954	0.17	-2.3
3,443,162	-		Pf6N2E2_2954	0.17	+0.3
3,443,183	-		Pf6N2E2_2954	0.18	-0.1
3,443,233	+		Pf6N2E2_2954	0.20	+0.9
3,443,644	+		Pf6N2E2_2954	0.37	-0.5
3,443,645	-		Pf6N2E2_2954	0.37	-0.1
3,443,839	+		Pf6N2E2_2954	0.45	+0.8
3,443,840	-		Pf6N2E2_2954	0.45	+0.1
3,443,840	-		Pf6N2E2_2954	0.45	+0.5
3,443,840	-		Pf6N2E2_2954	0.45	-0.5
3,444,175	+		Pf6N2E2_2954	0.59	+0.9
3,444,385	+		Pf6N2E2_2954	0.67	-0.6
3,444,385	+		Pf6N2E2_2954	0.67	+1.8
3,444,571	+		Pf6N2E2_2954	0.75	+2.4
3,444,571	+		Pf6N2E2_2954	0.75	-0.8
3,444,571	+		Pf6N2E2_2954	0.75	+0.4
3,444,571	+		Pf6N2E2_2954	0.75	+0.6
3,444,571	+		Pf6N2E2_2954	0.75	+1.1
3,444,572	-		Pf6N2E2_2954	0.75	-0.8
3,444,572	-		Pf6N2E2_2954	0.75	+0.6
3,444,572	-		Pf6N2E2_2954	0.75	+0.7
3,444,572	-		Pf6N2E2_2954	0.75	+0.2
3,444,572	-		Pf6N2E2_2954	0.75	+0.6
3,444,676	+		Pf6N2E2_2954	0.79	+0.9
3,444,734	+		Pf6N2E2_2954	0.81	+0.1
3,444,734	+		Pf6N2E2_2954	0.81	-0.0
3,444,734	+		Pf6N2E2_2954	0.81	-1.2
3,444,735	-		Pf6N2E2_2954	0.81	+0.2
3,444,735	-		Pf6N2E2_2954	0.81	+1.1
3,444,735	-		Pf6N2E2_2954	0.81	+0.1
3,444,735	-		Pf6N2E2_2954	0.81	+0.9
3,444,735	-		Pf6N2E2_2954	0.81	+0.2
3,444,735	-		Pf6N2E2_2954	0.81	+1.4
3,444,735	-		Pf6N2E2_2954	0.81	+0.1
3,444,735	-		Pf6N2E2_2954	0.81	+1.3
3,444,735	-		Pf6N2E2_2954	0.81	-0.3
3,444,735	-		Pf6N2E2_2954	0.81	+0.3
3,444,735	-		Pf6N2E2_2954	0.81	+0.3
3,444,735	-		Pf6N2E2_2954	0.81	+0.5
3,444,735	-		Pf6N2E2_2954	0.81	-0.1
3,444,891	-		Pf6N2E2_2954	0.88	+0.7
3,444,993	+				-0.6
3,445,072	+				+1.0
3,445,072	+				+1.3
3,445,072	+				-0.5
3,445,073	-				+0.6
3,445,073	-				+0.8
3,445,073	-				+0.2
3,445,073	-				+0.9
3,445,108	+				+0.5
3,445,109	-				-0.2
3,445,151	-				-0.6
3,445,187	-				+0.1
3,445,187	-				+0.4
3,445,209	+				+0.3
3,445,209	+				+0.1
3,445,209	+				-0.7
3,445,210	-				+0.6
3,445,210	-				-0.1
3,445,210	-				-0.0
3,445,210	-				-0.3
3,445,210	-				+0.2
3,445,212	+				+0.1
3,445,212	+				+0.3
3,445,212	+				+0.1
3,445,212	+				+0.9
3,445,212	+				-0.9
3,445,212	+				-0.6
3,445,212	+				-0.4
3,445,213	-				+1.5
3,445,213	-				+0.8
3,445,213	-				+0.1
3,445,213	-				-0.2
3,445,213	-				+0.9
3,445,251	-				-1.0
3,445,253	-				-1.9
3,445,253	-				-0.5
3,445,253	-				-1.5
3,445,253	-				-0.7
3,445,253	-				-1.3
3,445,253	-				-0.9
3,445,253	-				+0.2
3,445,253	-				-0.6
3,445,253	-				+1.9
3,445,253	-				+0.2
3,445,253	-				-0.2
3,445,253	-				+0.3