Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2832

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,320,706	+		Pf6N2E2_2831	0.68	-0.4
3,320,706	+		Pf6N2E2_2831	0.68	+0.9
3,320,828	+		Pf6N2E2_2831	0.77	+1.2
3,320,828	+		Pf6N2E2_2831	0.77	+0.4
3,320,838	+		Pf6N2E2_2831	0.77	+1.0
3,320,839	-		Pf6N2E2_2831	0.78	+1.6
3,320,839	-		Pf6N2E2_2831	0.78	+0.2
3,320,839	-		Pf6N2E2_2831	0.78	+0.0
3,320,950	-		Pf6N2E2_2831	0.86	-1.1
3,321,108	+				+1.4
3,321,108	+				+1.0
3,321,109	-				-1.1
3,321,109	-				+0.2
3,321,109	-				+0.4
3,321,145	+				+0.9
3,321,145	+				-0.9
3,321,145	+				+1.2
3,321,165	-				+0.2
3,321,165	-				-2.4
3,321,165	-				-0.2
3,321,165	-				-0.8
3,321,165	-				+0.2
3,321,165	-				-1.1
3,321,165	-				-0.2
3,321,165	-				+1.1
3,321,317	+				+0.5
3,321,317	+				+0.9
3,321,380	+				+0.3
3,321,380	+				-0.4
3,321,380	+				+0.6
3,321,380	+				-0.0
3,321,381	-				-0.5
3,321,381	-				+0.0
3,321,381	-				-0.2
3,321,381	-				-0.4
3,321,431	+		Pf6N2E2_2832	0.10	-1.1
3,321,431	+		Pf6N2E2_2832	0.10	-1.0
3,321,431	+		Pf6N2E2_2832	0.10	-0.4
3,321,431	+		Pf6N2E2_2832	0.10	-0.5
3,321,432	-		Pf6N2E2_2832	0.10	-1.2
3,321,432	-		Pf6N2E2_2832	0.10	-0.3
3,321,432	-		Pf6N2E2_2832	0.10	-1.2
3,321,470	+		Pf6N2E2_2832	0.13	-2.7
3,321,471	-		Pf6N2E2_2832	0.13	-0.8
3,321,481	+		Pf6N2E2_2832	0.14	+0.6
3,321,481	+		Pf6N2E2_2832	0.14	+1.4
3,321,481	+		Pf6N2E2_2832	0.14	+0.6
3,321,482	-		Pf6N2E2_2832	0.14	+0.9
3,321,482	-		Pf6N2E2_2832	0.14	+0.5
3,321,482	-		Pf6N2E2_2832	0.14	-1.5
3,321,545	+		Pf6N2E2_2832	0.19	+0.3
3,321,545	+		Pf6N2E2_2832	0.19	-0.4
3,321,545	+		Pf6N2E2_2832	0.19	-0.5
3,321,546	-		Pf6N2E2_2832	0.19	+0.1
3,321,546	-		Pf6N2E2_2832	0.19	-1.7
3,321,546	-		Pf6N2E2_2832	0.19	+0.5
3,321,546	-		Pf6N2E2_2832	0.19	-0.1
3,321,546	-		Pf6N2E2_2832	0.19	+0.2
3,321,546	-		Pf6N2E2_2832	0.19	-0.3
3,321,676	-		Pf6N2E2_2832	0.29	-1.5
3,321,728	+		Pf6N2E2_2832	0.33	+0.2
3,321,728	+		Pf6N2E2_2832	0.33	-0.0
3,321,728	+		Pf6N2E2_2832	0.33	-0.4
3,321,728	+		Pf6N2E2_2832	0.33	-0.1
3,321,728	+		Pf6N2E2_2832	0.33	-1.0
3,321,728	+		Pf6N2E2_2832	0.33	-1.5
3,321,729	-				-0.5
3,321,729	-		Pf6N2E2_2832	0.33	-0.5
3,321,755	+		Pf6N2E2_2832	0.35	+0.6
3,321,755	+		Pf6N2E2_2832	0.35	+0.4
3,321,755	+		Pf6N2E2_2832	0.35	-1.7
3,321,756	-		Pf6N2E2_2832	0.35	+0.2
3,321,756	-		Pf6N2E2_2832	0.35	-0.4
3,321,756	-		Pf6N2E2_2832	0.35	+0.0
3,321,797	+		Pf6N2E2_2832	0.38	+0.3
3,321,797	+		Pf6N2E2_2832	0.38	-1.4
3,321,798	-		Pf6N2E2_2832	0.38	+1.2
3,321,798	-		Pf6N2E2_2832	0.38	-2.0
3,321,798	-		Pf6N2E2_2832	0.38	+0.5
3,321,809	+		Pf6N2E2_2832	0.39	-0.5
3,321,809	+		Pf6N2E2_2832	0.39	+1.2
3,321,809	+		Pf6N2E2_2832	0.39	+1.2
3,321,809	+		Pf6N2E2_2832	0.39	-0.5
3,321,809	+		Pf6N2E2_2832	0.39	-0.1
3,321,809	+		Pf6N2E2_2832	0.39	-0.0
3,321,809	+		Pf6N2E2_2832	0.39	+1.8
3,321,809	+		Pf6N2E2_2832	0.39	-1.1
3,321,809	+		Pf6N2E2_2832	0.39	-1.3
3,321,809	+		Pf6N2E2_2832	0.39	+0.2
3,321,809	+		Pf6N2E2_2832	0.39	+0.2
3,321,810	-		Pf6N2E2_2832	0.39	-1.1
3,321,810	-		Pf6N2E2_2832	0.39	+1.1
3,321,810	-		Pf6N2E2_2832	0.39	-1.7
3,321,810	-		Pf6N2E2_2832	0.39	-0.5
3,322,022	+		Pf6N2E2_2832	0.56	+0.9
3,322,023	-		Pf6N2E2_2832	0.56	-0.3
3,322,023	-		Pf6N2E2_2832	0.56	+0.3
3,322,109	+		Pf6N2E2_2832	0.62	+0.6
3,322,109	+		Pf6N2E2_2832	0.62	+0.6
3,322,163	+		Pf6N2E2_2832	0.67	-0.5
3,322,163	+		Pf6N2E2_2832	0.67	+0.5
3,322,163	+		Pf6N2E2_2832	0.67	+0.3
3,322,163	+		Pf6N2E2_2832	0.67	-2.0
3,322,163	+		Pf6N2E2_2832	0.67	+0.0
3,322,163	+		Pf6N2E2_2832	0.67	-0.8
3,322,163	+		Pf6N2E2_2832	0.67	+0.9
3,322,163	+		Pf6N2E2_2832	0.67	+1.1
3,322,164	-		Pf6N2E2_2832	0.67	+0.5
3,322,164	-		Pf6N2E2_2832	0.67	-0.7
3,322,164	-		Pf6N2E2_2832	0.67	+0.5
3,322,164	-		Pf6N2E2_2832	0.67	+0.0
3,322,164	-		Pf6N2E2_2832	0.67	-0.4
3,322,164	-		Pf6N2E2_2832	0.67	-0.7
3,322,164	-		Pf6N2E2_2832	0.67	+0.9
3,322,164	-		Pf6N2E2_2832	0.67	+0.0
3,322,164	-		Pf6N2E2_2832	0.67	-0.4
3,322,259	+		Pf6N2E2_2832	0.74	-1.2
3,322,259	+		Pf6N2E2_2832	0.74	-0.4
3,322,260	-		Pf6N2E2_2832	0.74	+0.5
3,322,260	-		Pf6N2E2_2832	0.74	+0.0
3,322,329	+		Pf6N2E2_2832	0.79	+0.5
3,322,330	-		Pf6N2E2_2832	0.79	+0.8
3,322,330	-		Pf6N2E2_2832	0.79	-0.9
3,322,484	+				+0.0
3,322,484	+				+0.6
3,322,485	-				-0.8
3,322,485	-				+1.0
3,322,485	-				+0.5
3,322,490	+				+0.3
3,322,490	+				+0.3
3,322,490	+				-1.2
3,322,490	+				+0.8
3,322,490	+				-0.9
3,322,490	+				-0.1
3,322,490	+				-0.1
3,322,490	+				-1.0
3,322,490	+				+0.5
3,322,490	+				+1.8
3,322,490	+				+1.0
3,322,490	+				-0.6
3,322,490	+				+1.1
3,322,490	+				+0.7
3,322,491	-				-0.2
3,322,491	-				-2.2
3,322,491	-				+1.0
3,322,491	-				+1.1
3,322,491	-				-1.5
3,322,491	-				+1.4
3,322,491	-				-0.7
3,322,491	-				+0.1
3,322,491	-				+0.6
3,322,491	-				-0.3
3,322,545	+				+1.6
3,322,545	+				-0.3
3,322,546	-				-0.3
3,322,546	-				-0.2
3,322,546	-				+1.0
3,322,572	-				-0.3
3,322,572	-				-0.7
3,322,572	-				+0.7
3,322,602	+				-0.6
3,322,640	-				-0.9
3,322,640	-				-0.9
3,322,640	-				+0.1
3,322,686	+				-0.2
3,322,730	+				+1.8
3,322,730	+				+0.1
3,322,730	+				+1.7
3,322,730	+				-0.5
3,322,731	-				+0.0
3,322,731	-				+0.5
3,322,731	-				+1.0
3,322,747	-				+1.7
3,322,747	-				+1.7
3,322,747	-				-0.3
3,322,747	-				-0.0
3,322,747	-				+2.0
3,322,754	+				+0.1
3,322,754	+				-0.5
3,322,754	+				-0.5
3,322,755	-				-0.3
3,322,853	-				+0.6
3,322,985	-		Pf6N2E2_2833	0.10	-0.1
3,323,086	+		Pf6N2E2_2833	0.28	-1.3
3,323,199	-		Pf6N2E2_2833	0.48	+0.4
3,323,199	-		Pf6N2E2_2833	0.48	-0.6
3,323,293	+		Pf6N2E2_2833	0.65	-0.8
3,323,293	+		Pf6N2E2_2833	0.65	-0.3
3,323,293	+		Pf6N2E2_2833	0.65	+0.6
3,323,294	-		Pf6N2E2_2833	0.65	-0.2
3,323,294	-		Pf6N2E2_2833	0.65	-2.0
3,323,294	-		Pf6N2E2_2833	0.65	+0.7
3,323,294	-		Pf6N2E2_2833	0.65	-0.5
3,323,449	+				+1.7
3,323,449	+				+0.9
3,323,450	-				+0.1
3,323,450	-				+0.8
3,323,453	-				-0.5
3,323,453	-				-0.5
3,323,495	+				+0.1
3,323,495	+				+1.0
3,323,495	+				+0.5
3,323,495	+				+0.3
3,323,495	+				+0.8
3,323,496	-				-0.5
3,323,496	-				+1.1
3,323,496	-				-0.4
3,323,496	-				+0.0
3,323,496	-				-1.0
3,323,496	-				-0.8
3,323,496	-				+0.8
3,323,558	+				+0.8