Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2823

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,308,528	-				-0.5
3,308,528	-				-1.0
3,308,550	+				+2.3
3,308,575	+				+5.7
3,308,576	-				-1.7
3,308,607	-				-0.3
3,308,666	-				+6.9
3,308,666	-				+6.8
3,308,739	+		Pf6N2E2_2822	0.17	+7.0
3,308,739	+		Pf6N2E2_2822	0.17	+6.9
3,308,739	+		Pf6N2E2_2822	0.17	+7.1
3,308,740	-		Pf6N2E2_2822	0.17	+5.9
3,308,920	+		Pf6N2E2_2822	0.45	+7.7
3,308,920	+		Pf6N2E2_2822	0.45	+6.6
3,308,920	+		Pf6N2E2_2822	0.45	+8.0
3,308,920	+		Pf6N2E2_2822	0.45	+8.0
3,308,920	+		Pf6N2E2_2822	0.45	+8.3
3,308,920	+		Pf6N2E2_2822	0.45	+6.9
3,308,921	-		Pf6N2E2_2822	0.45	+5.7
3,308,921	-		Pf6N2E2_2822	0.45	+5.9
3,308,921	-		Pf6N2E2_2822	0.45	+5.9
3,308,921	-		Pf6N2E2_2822	0.45	+6.2
3,308,939	-		Pf6N2E2_2822	0.48	+6.5
3,309,002	-		Pf6N2E2_2822	0.58	+5.8
3,309,002	-		Pf6N2E2_2822	0.58	+6.2
3,309,120	+		Pf6N2E2_2822	0.77	+7.8
3,309,120	+		Pf6N2E2_2822	0.77	+6.0
3,309,120	+		Pf6N2E2_2822	0.77	+7.0
3,309,120	+		Pf6N2E2_2822	0.77	+7.1
3,309,121	-		Pf6N2E2_2822	0.77	+4.9
3,309,121	-		Pf6N2E2_2822	0.77	+5.9
3,309,271	+				+6.9
3,309,271	+				+8.0
3,309,272	-				-0.1
3,309,304	+				+7.8
3,309,305	-				-1.5
3,309,305	-				-2.4
3,309,315	+				+6.8
3,309,315	+				+7.5
3,309,315	+				+7.7
3,309,315	+				+7.3
3,309,315	+				+6.7
3,309,379	+				+7.6
3,309,379	+				+7.6
3,309,379	+				+7.3
3,309,383	+				+6.8
3,309,383	+				+7.6
3,309,384	-				-3.5
3,309,423	+				+6.2
3,309,427	+				+4.7
3,309,433	+				+5.3
3,309,441	-				-1.0
3,309,448	+				+3.3
3,309,448	+				+1.0
3,309,797	+		Pf6N2E2_2823	0.23	-2.0
3,309,818	+		Pf6N2E2_2823	0.25	-4.0
3,309,818	+		Pf6N2E2_2823	0.25	-2.5
3,309,819	-		Pf6N2E2_2823	0.25	-1.5
3,309,924	-		Pf6N2E2_2823	0.34	-2.0
3,309,992	+		Pf6N2E2_2823	0.40	-3.3
3,309,993	-		Pf6N2E2_2823	0.40	-2.5
3,310,004	+		Pf6N2E2_2823	0.41	-3.4
3,310,112	+		Pf6N2E2_2823	0.51	-1.4
3,310,113	-		Pf6N2E2_2823	0.51	+0.0
3,310,113	-		Pf6N2E2_2823	0.51	-2.8
3,310,238	+		Pf6N2E2_2823	0.61	-3.0
3,310,657	+				-1.7
3,310,658	-				-1.5
3,310,916	+				-2.8
3,310,917	-				-0.4
3,310,920	+				-3.3
3,310,920	+				-3.0
3,310,920	+				-1.3
3,310,921	-				-1.5
3,310,934	-				-1.0
3,311,156	+		Pf6N2E2_2824	0.15	-1.5
3,311,156	+		Pf6N2E2_2824	0.15	-2.5
3,311,156	+		Pf6N2E2_2824	0.15	-3.5
3,311,232	-		Pf6N2E2_2824	0.17	-3.5
3,311,386	+		Pf6N2E2_2824	0.22	-1.8
3,311,387	-		Pf6N2E2_2824	0.22	-2.5
3,311,387	-		Pf6N2E2_2824	0.22	-2.0
3,311,387	-		Pf6N2E2_2824	0.22	-1.8
3,311,510	+		Pf6N2E2_2824	0.26	+0.8
3,311,510	+		Pf6N2E2_2824	0.26	-3.4
3,311,510	+		Pf6N2E2_2824	0.26	-3.4
3,311,511	-		Pf6N2E2_2824	0.26	-2.3
3,311,511	-		Pf6N2E2_2824	0.26	+0.0