Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2806

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,290,972	+		Pf6N2E2_2804	0.42	-0.9
3,290,972	+		Pf6N2E2_2804	0.42	+1.0
3,290,972	+		Pf6N2E2_2804	0.42	-0.6
3,290,972	+		Pf6N2E2_2804	0.42	+0.3
3,290,972	+		Pf6N2E2_2804	0.42	+1.4
3,290,973	-		Pf6N2E2_2804	0.42	+0.6
3,290,973	-		Pf6N2E2_2804	0.42	+1.3
3,290,973	-		Pf6N2E2_2804	0.42	+0.5
3,291,005	+		Pf6N2E2_2804	0.52	-0.4
3,291,005	+		Pf6N2E2_2804	0.52	+0.2
3,291,005	+		Pf6N2E2_2804	0.52	+1.6
3,291,074	+		Pf6N2E2_2804	0.72	+0.2
3,291,074	+		Pf6N2E2_2804	0.72	-1.7
3,291,074	+		Pf6N2E2_2804	0.72	-1.2
3,291,074	+		Pf6N2E2_2804	0.72	-0.2
3,291,074	+		Pf6N2E2_2804	0.72	-0.6
3,291,074	+		Pf6N2E2_2804	0.72	+1.2
3,291,075	-		Pf6N2E2_2804	0.72	+0.4
3,291,075	-		Pf6N2E2_2804	0.72	+1.1
3,291,075	-		Pf6N2E2_2804	0.72	+3.0
3,291,075	-				+1.0
3,291,075	-		Pf6N2E2_2804	0.72	+0.0
3,291,119	-		Pf6N2E2_2804	0.85	+0.7
3,291,208	+				-0.2
3,291,208	+				+0.7
3,291,251	+				+0.3
3,291,251	+				-0.9
3,291,252	-				+1.2
3,291,252	-				-1.2
3,291,252	-				-1.3
3,291,252	-				-0.1
3,291,252	-				+0.9
3,291,254	+				-0.6
3,291,254	+				+0.1
3,291,254	+				-0.8
3,291,254	+				+1.4
3,291,254	+				+0.2
3,291,254	+				-2.1
3,291,254	+				+0.6
3,291,254	+				-0.4
3,291,255	-				-0.1
3,291,255	-				+1.0
3,291,255	-				+0.3
3,291,255	-				+0.5
3,291,255	-				+0.8
3,291,255	-				+0.7
3,291,255	-				-0.7
3,291,255	-				+0.9
3,291,255	-				+1.2
3,291,255	-				+0.1
3,291,376	-		Pf6N2E2_2805	0.21	+1.7
3,291,377	+		Pf6N2E2_2805	0.21	-0.2
3,291,377	+		Pf6N2E2_2805	0.21	+1.9
3,291,377	+		Pf6N2E2_2805	0.21	+0.4
3,291,377	+		Pf6N2E2_2805	0.21	+1.1
3,291,377	+		Pf6N2E2_2805	0.21	-0.2
3,291,377	+		Pf6N2E2_2805	0.21	+0.3
3,291,377	+		Pf6N2E2_2805	0.21	+1.2
3,291,377	+		Pf6N2E2_2805	0.21	-2.3
3,291,377	+		Pf6N2E2_2805	0.21	+0.1
3,291,377	+		Pf6N2E2_2805	0.21	+2.0
3,291,378	-		Pf6N2E2_2805	0.21	+0.2
3,291,378	-		Pf6N2E2_2805	0.21	-1.6
3,291,378	-		Pf6N2E2_2805	0.21	+0.6
3,291,378	-		Pf6N2E2_2805	0.21	-0.4
3,291,378	-		Pf6N2E2_2805	0.21	+1.6
3,291,378	-		Pf6N2E2_2805	0.21	+0.4
3,291,378	-		Pf6N2E2_2805	0.21	-0.4
3,291,378	-		Pf6N2E2_2805	0.21	+1.4
3,291,554	+		Pf6N2E2_2805	0.52	-0.1
3,291,555	-		Pf6N2E2_2805	0.52	+0.9
3,291,594	-		Pf6N2E2_2805	0.59	+0.8
3,291,659	+		Pf6N2E2_2805	0.70	+0.4
3,291,659	+		Pf6N2E2_2805	0.70	-0.1
3,291,659	+		Pf6N2E2_2805	0.70	+0.8
3,291,659	+		Pf6N2E2_2805	0.70	+1.0
3,291,659	+		Pf6N2E2_2805	0.70	+0.4
3,291,659	+		Pf6N2E2_2805	0.70	-0.1
3,291,659	+		Pf6N2E2_2805	0.70	-0.3
3,291,660	-		Pf6N2E2_2805	0.70	+2.2
3,291,660	-		Pf6N2E2_2805	0.70	+0.8
3,291,660	-		Pf6N2E2_2805	0.70	-0.3
3,291,660	-		Pf6N2E2_2805	0.70	+0.0
3,291,786	-				-0.0
3,291,786	-				-1.1
3,291,786	-				-0.5
3,291,786	-				+0.4
3,291,797	+				+0.3
3,291,797	+				-0.9
3,291,798	-				-0.7
3,291,798	-				+0.9
3,291,861	+				-0.6
3,291,861	+				+0.8
3,291,862	-				+1.6
3,291,862	-				+0.5
3,291,862	-				+0.6
3,291,877	+				+2.1
3,291,878	-				-0.6
3,291,883	+				+0.5
3,291,883	+				+0.8
3,291,891	+				+1.0
3,291,911	-				-1.0
3,291,921	+				+4.7
3,291,922	-				-0.2
3,291,922	-				+0.8
3,291,922	-				-1.1
3,291,974	+				+5.9
3,291,975	-				+7.3
3,292,229	+		Pf6N2E2_2806	0.22	+6.4
3,292,545	-		Pf6N2E2_2806	0.48	+6.7
3,292,545	-		Pf6N2E2_2806	0.48	+7.2
3,292,568	+		Pf6N2E2_2806	0.50	+7.5
3,292,853	+		Pf6N2E2_2806	0.73	+7.3
3,292,853	+		Pf6N2E2_2806	0.73	+6.5
3,292,979	+		Pf6N2E2_2806	0.83	+7.5
3,293,062	+				+7.5
3,293,062	+				+6.1
3,293,063	-				+5.9
3,293,066	+				+7.2
3,293,066	+				+6.9
3,293,066	+				+7.4
3,293,066	+				+6.9
3,293,066	+				+7.5
3,293,067	-				+5.8
3,293,067	-				+6.9
3,293,067	-				+8.4
3,293,067	-				+7.2
3,293,067	-				+7.6
3,293,067	-				+7.4
3,293,224	-				-0.2
3,293,229	-				+0.7
3,293,477	+				-0.2
3,293,496	+				+1.5
3,293,496	+				-0.7
3,293,496	+				+0.8
3,293,496	+				+1.0
3,293,496	+				-0.4
3,293,497	-				-1.5
3,293,690	+		Pf6N2E2_2807	0.15	+0.9
3,293,918	+		Pf6N2E2_2807	0.30	+0.7
3,293,919	-		Pf6N2E2_2807	0.30	-0.0
3,293,973	+		Pf6N2E2_2807	0.34	+0.6
3,293,975	+		Pf6N2E2_2807	0.34	+1.4
3,293,975	+		Pf6N2E2_2807	0.34	+0.8
3,293,975	+		Pf6N2E2_2807	0.34	-0.8
3,293,975	+		Pf6N2E2_2807	0.34	+1.0
3,293,975	+		Pf6N2E2_2807	0.34	-0.3
3,293,975	+		Pf6N2E2_2807	0.34	-0.4
3,293,976	-		Pf6N2E2_2807	0.34	+1.0
3,293,976	-		Pf6N2E2_2807	0.34	-0.3
3,293,976	-		Pf6N2E2_2807	0.34	-0.3
3,293,976	-		Pf6N2E2_2807	0.34	-3.2
3,293,976	-		Pf6N2E2_2807	0.34	+0.3
3,293,976	-		Pf6N2E2_2807	0.34	+0.0
3,293,976	-		Pf6N2E2_2807	0.34	-0.7
3,293,976	-		Pf6N2E2_2807	0.34	+1.6
3,293,976	-		Pf6N2E2_2807	0.34	-1.8
3,293,976	-		Pf6N2E2_2807	0.34	+0.2
3,293,976	-		Pf6N2E2_2807	0.34	+0.7
3,293,976	-		Pf6N2E2_2807	0.34	-0.1
3,293,982	-		Pf6N2E2_2807	0.34	+0.5
3,293,982	-		Pf6N2E2_2807	0.34	+0.1
3,294,098	-		Pf6N2E2_2807	0.42	-0.3
3,294,114	+		Pf6N2E2_2807	0.43	-2.3
3,294,115	-		Pf6N2E2_2807	0.43	-3.2
3,294,118	-		Pf6N2E2_2807	0.44	-0.7
3,294,118	-		Pf6N2E2_2807	0.44	-0.7
3,294,118	-		Pf6N2E2_2807	0.44	+0.6
3,294,118	-		Pf6N2E2_2807	0.44	-0.5