Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2750

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,241,172	+		Pf6N2E2_2748	0.52	-2.4
3,241,172	+		Pf6N2E2_2748	0.52	+1.8
3,241,173	-		Pf6N2E2_2748	0.52	-0.4
3,241,181	+		Pf6N2E2_2748	0.53	+1.7
3,241,181	+		Pf6N2E2_2748	0.53	+1.1
3,241,181	+		Pf6N2E2_2748	0.53	+0.8
3,241,181	+		Pf6N2E2_2748	0.53	-0.8
3,241,182	-		Pf6N2E2_2748	0.54	+0.2
3,241,182	-		Pf6N2E2_2748	0.54	+1.0
3,241,182	-		Pf6N2E2_2748	0.54	+0.5
3,241,182	-		Pf6N2E2_2748	0.54	+0.9
3,241,182	-		Pf6N2E2_2748	0.54	+0.9
3,241,182	-		Pf6N2E2_2748	0.54	+0.7
3,241,277	+		Pf6N2E2_2748	0.71	-0.4
3,241,277	+		Pf6N2E2_2748	0.71	+0.8
3,241,277	+		Pf6N2E2_2748	0.71	-0.5
3,241,277	+		Pf6N2E2_2748	0.71	-0.8
3,241,277	+		Pf6N2E2_2748	0.71	-0.3
3,241,277	+		Pf6N2E2_2748	0.71	+0.5
3,241,278	-		Pf6N2E2_2748	0.71	+0.3
3,241,278	-		Pf6N2E2_2748	0.71	+0.5
3,241,278	-		Pf6N2E2_2748	0.71	-2.0
3,241,278	-		Pf6N2E2_2748	0.71	+1.3
3,241,278	-		Pf6N2E2_2748	0.71	+0.5
3,241,278	-		Pf6N2E2_2748	0.71	-2.0
3,241,439	+				-1.0
3,241,439	+				+0.7
3,241,439	+				+0.6
3,241,439	+				+0.2
3,241,439	+				+0.1
3,241,440	-				+0.4
3,241,440	-				+0.3
3,241,440	-				+0.3
3,241,440	-				+0.8
3,241,440	-				+0.3
3,241,554	+		Pf6N2E2_2749	0.22	-0.3
3,241,554	+		Pf6N2E2_2749	0.22	+0.2
3,241,554	+		Pf6N2E2_2749	0.22	+2.0
3,241,554	+		Pf6N2E2_2749	0.22	+0.2
3,241,554	+		Pf6N2E2_2749	0.22	+0.3
3,241,555	-		Pf6N2E2_2749	0.22	-0.4
3,241,555	-		Pf6N2E2_2749	0.22	+0.7
3,241,555	-		Pf6N2E2_2749	0.22	-0.3
3,241,560	+		Pf6N2E2_2749	0.23	-0.0
3,241,561	-		Pf6N2E2_2749	0.23	-1.4
3,241,561	-		Pf6N2E2_2749	0.23	-0.9
3,241,561	-		Pf6N2E2_2749	0.23	-0.0
3,241,618	-		Pf6N2E2_2749	0.35	+1.0
3,241,618	-		Pf6N2E2_2749	0.35	+0.3
3,241,794	+		Pf6N2E2_2749	0.72	-0.6
3,241,794	+		Pf6N2E2_2749	0.72	-0.0
3,241,795	-		Pf6N2E2_2749	0.72	-0.7
3,241,795	-		Pf6N2E2_2749	0.72	-0.0
3,241,795	-		Pf6N2E2_2749	0.72	-1.4
3,241,941	+				-0.4
3,241,994	+				-0.8
3,242,056	+				-0.9
3,242,057	-				-0.9
3,242,057	-				+0.4
3,242,253	+		Pf6N2E2_2750	0.18	+0.3
3,242,253	+		Pf6N2E2_2750	0.18	-1.4
3,242,253	+		Pf6N2E2_2750	0.18	-1.4
3,242,254	-		Pf6N2E2_2750	0.19	-1.1
3,242,254	-		Pf6N2E2_2750	0.19	-1.6
3,242,254	-		Pf6N2E2_2750	0.19	-0.3
3,242,287	+		Pf6N2E2_2750	0.22	-1.7
3,242,288	-		Pf6N2E2_2750	0.22	-0.6
3,242,365	+		Pf6N2E2_2750	0.29	-1.9
3,242,413	+		Pf6N2E2_2750	0.33	-1.8
3,242,443	+		Pf6N2E2_2750	0.36	-1.0
3,242,443	+		Pf6N2E2_2750	0.36	-0.7
3,242,443	+		Pf6N2E2_2750	0.36	-1.0
3,242,444	-		Pf6N2E2_2750	0.36	-1.9
3,242,444	-		Pf6N2E2_2750	0.36	-1.8
3,242,444	-		Pf6N2E2_2750	0.36	-0.8
3,242,444	-		Pf6N2E2_2750	0.36	-0.5
3,242,444	-		Pf6N2E2_2750	0.36	-0.5
3,242,444	-		Pf6N2E2_2750	0.36	-0.7
3,242,444	-		Pf6N2E2_2750	0.36	-1.6
3,242,491	+		Pf6N2E2_2750	0.41	-1.6
3,242,492	-		Pf6N2E2_2750	0.41	-0.0
3,242,632	+		Pf6N2E2_2750	0.54	-0.5
3,242,633	-		Pf6N2E2_2750	0.54	+1.2
3,242,633	-		Pf6N2E2_2750	0.54	-0.6
3,242,633	-		Pf6N2E2_2750	0.54	-1.9
3,242,872	-		Pf6N2E2_2750	0.76	-0.7
3,242,977	+		Pf6N2E2_2750	0.86	-2.0
3,243,092	-				+0.6
3,243,092	-				+0.3
3,243,380	+				+3.0
3,243,380	+				-0.2
3,243,427	+				-0.3
3,243,428	-				-0.0
3,243,432	+				-1.7
3,243,432	+				+1.5
3,243,432	+				-0.2
3,243,432	+				+0.7
3,243,433	-				+0.1
3,243,433	-				-0.3
3,243,433	-				+0.6
3,243,459	+				-0.7
3,243,464	+				+0.4
3,243,464	+				-0.7
3,243,464	+				-0.1
3,243,464	+				-0.1
3,243,465	-				-3.3
3,243,481	-				-2.9
3,243,688	+		Pf6N2E2_2752	0.14	-3.0
3,243,688	+		Pf6N2E2_2752	0.14	+1.6
3,243,689	-		Pf6N2E2_2752	0.14	-0.6
3,243,706	+		Pf6N2E2_2752	0.15	-1.8
3,243,706	+		Pf6N2E2_2752	0.15	-2.3
3,243,707	-		Pf6N2E2_2752	0.15	-1.0
3,243,853	+		Pf6N2E2_2752	0.25	-2.3
3,243,854	-		Pf6N2E2_2752	0.25	-0.5
3,244,117	+		Pf6N2E2_2752	0.44	-2.3