Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2699

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,191,642	-		Pf6N2E2_2698	0.29	+0.6
3,191,836	+		Pf6N2E2_2698	0.51	-0.3
3,191,836	+		Pf6N2E2_2698	0.51	-0.7
3,191,836	+		Pf6N2E2_2698	0.51	-0.4
3,191,836	+		Pf6N2E2_2698	0.51	-1.4
3,191,836	+		Pf6N2E2_2698	0.51	+2.5
3,191,837	-		Pf6N2E2_2698	0.51	+0.1
3,191,837	-		Pf6N2E2_2698	0.51	+0.8
3,192,261	+				-1.1
3,192,270	+				+0.9
3,192,270	+				+0.9
3,192,270	+				-0.5
3,192,271	-				-0.8
3,192,271	-				-1.7
3,192,271	-				-0.7
3,192,271	-				-1.4
3,192,384	-				+2.4
3,192,384	-				-0.8
3,192,393	+				+0.3
3,192,394	-				+0.4
3,192,394	-				-0.9
3,192,406	+				+0.1
3,192,423	+				+0.3
3,192,566	-				-0.3
3,192,586	+				-0.3
3,192,593	+				-3.1
3,192,594	-				+0.5
3,192,598	-				+0.8
3,192,738	+		Pf6N2E2_2699	0.15	-1.1
3,192,738	+		Pf6N2E2_2699	0.15	-2.7
3,192,918	+		Pf6N2E2_2699	0.34	-1.1
3,192,919	-		Pf6N2E2_2699	0.34	-1.9
3,192,919	-		Pf6N2E2_2699	0.34	-1.1
3,192,919	-		Pf6N2E2_2699	0.34	-4.4
3,192,919	-		Pf6N2E2_2699	0.34	-3.1
3,192,961	-		Pf6N2E2_2699	0.39	-4.0
3,192,961	-		Pf6N2E2_2699	0.39	-3.1
3,192,961	-		Pf6N2E2_2699	0.39	-0.1
3,193,189	-		Pf6N2E2_2699	0.63	-2.5
3,193,261	-		Pf6N2E2_2699	0.71	-1.0
3,193,261	-		Pf6N2E2_2699	0.71	-4.2
3,193,261	-		Pf6N2E2_2699	0.71	-1.8
3,193,353	+		Pf6N2E2_2699	0.81	-0.9
3,193,353	+		Pf6N2E2_2699	0.81	-4.3
3,193,353	+		Pf6N2E2_2699	0.81	-2.1
3,193,383	+		Pf6N2E2_2699	0.84	-1.9
3,193,384	-		Pf6N2E2_2699	0.84	-2.6
3,193,396	+		Pf6N2E2_2699	0.85	-4.3
3,193,397	-		Pf6N2E2_2699	0.85	-1.4
3,193,399	-		Pf6N2E2_2699	0.86	-0.5
3,193,399	-		Pf6N2E2_2699	0.86	-1.7
3,193,399	-		Pf6N2E2_2699	0.86	-1.7
3,193,473	+				-3.5
3,193,473	+				-1.4
3,193,575	-				+0.2
3,193,586	+				-2.1
3,193,675	+				-2.7
3,193,675	+				-1.5
3,193,725	+				-1.5
3,193,725	+				-0.8
3,193,726	-				+0.6
3,193,726	-				-0.2
3,193,726	-				+2.4
3,193,726	-				+0.1
3,193,889	+				-0.2
3,193,889	+				-1.1
3,193,890	-				+0.6
3,193,890	-				+0.4
3,194,021	+				+0.2
3,194,021	+				+0.9
3,194,022	-				-1.3
3,194,189	-		Pf6N2E2_2700	0.23	+0.6
3,194,373	-		Pf6N2E2_2700	0.42	+0.4
3,194,373	-		Pf6N2E2_2700	0.42	-0.7
3,194,373	-		Pf6N2E2_2700	0.42	-0.4
3,194,373	-		Pf6N2E2_2700	0.42	-0.3
3,194,522	+		Pf6N2E2_2700	0.57	+0.5
3,194,522	+		Pf6N2E2_2700	0.57	+0.2
3,194,522	+		Pf6N2E2_2700	0.57	-0.3
3,194,522	+		Pf6N2E2_2700	0.57	+1.9
3,194,522	+		Pf6N2E2_2700	0.57	+0.1
3,194,523	-		Pf6N2E2_2700	0.57	-2.3
3,194,523	-		Pf6N2E2_2700	0.57	-0.3