Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2694

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,182,881	-		Pf6N2E2_2693	0.65	-0.6
3,182,881	-		Pf6N2E2_2693	0.65	-0.1
3,183,186	+				-2.4
3,183,186	+				+0.3
3,183,186	+				-0.8
3,183,186	+				-2.3
3,183,186	+				-0.6
3,183,187	-				-1.4
3,183,187	-				-1.5
3,183,187	-				-1.4
3,183,187	-				-0.1
3,183,187	-				-1.4
3,183,187	-				-0.5
3,183,187	-				-0.6
3,183,187	-				-0.4
3,183,187	-				-1.2
3,183,187	-				+0.2
3,183,187	-				-1.1
3,183,187	-				-2.3
3,183,191	-				-1.6
3,183,191	-				+0.3
3,183,191	-				-0.1
3,183,240	+				-1.3
3,183,240	+				-1.1
3,183,240	+				-1.7
3,183,241	-				-0.1
3,183,241	-				-0.8
3,183,241	-				+0.7
3,183,241	-				-1.0
3,183,241	-				-2.1
3,183,241	-				-0.8
3,183,269	-				-2.5
3,183,320	+				-0.3
3,183,320	+				-1.7
3,183,321	-				-0.8
3,183,321	-				-0.4
3,183,321	-				+1.2
3,183,321	-				-0.4
3,183,321	-				-2.4
3,183,326	+				-2.0
3,183,327	-				+1.2
3,183,424	+				-0.9
3,183,424	+				-0.5
3,183,424	+				-1.7
3,183,425	-				+0.1
3,183,425	-				-0.1
3,183,425	-				+0.9
3,183,425	-				+0.0
3,183,427	-				+0.6
3,183,477	+				-0.3
3,183,477	+				-0.3
3,183,477	+				-0.8
3,183,477	+				-0.5
3,183,478	-				+1.4
3,183,478	-				+1.0
3,183,478	-				+0.5
3,183,478	-				-1.1
3,183,478	-				+0.3
3,183,478	-				-1.7
3,183,478	-				-0.2
3,183,480	+				-0.7
3,183,480	+				-0.7
3,183,480	+				-3.2
3,183,481	-				-0.5
3,183,481	-				-1.1
3,183,481	-				-0.5
3,183,481	-				+0.0
3,183,484	+				+1.9
3,183,845	+				+0.4
3,183,846	-				-0.8
3,183,874	-				+0.9
3,184,133	+		Pf6N2E2_2694	0.16	-0.1
3,184,308	-		Pf6N2E2_2694	0.20	-0.1
3,184,844	+		Pf6N2E2_2694	0.34	+1.4
3,184,845	-		Pf6N2E2_2694	0.34	+0.7
3,184,845	-		Pf6N2E2_2694	0.34	-1.4
3,184,845	-		Pf6N2E2_2694	0.34	+1.5
3,184,845	-		Pf6N2E2_2694	0.34	+0.7
3,185,036	+		Pf6N2E2_2694	0.39	+0.3
3,185,037	-		Pf6N2E2_2694	0.39	-0.1
3,185,045	+		Pf6N2E2_2694	0.39	-3.3
3,185,045	+		Pf6N2E2_2694	0.39	-0.5
3,185,046	-		Pf6N2E2_2694	0.39	+0.3
3,185,046	-		Pf6N2E2_2694	0.39	-1.4
3,185,276	+		Pf6N2E2_2694	0.45	-0.9
3,185,276	+		Pf6N2E2_2694	0.45	+0.7
3,185,277	-		Pf6N2E2_2694	0.45	-0.1
3,185,277	-		Pf6N2E2_2694	0.45	+0.8
3,185,393	+		Pf6N2E2_2694	0.48	-2.3
3,185,394	-		Pf6N2E2_2694	0.48	+0.4
3,185,394	-		Pf6N2E2_2694	0.48	+0.4
3,185,667	-		Pf6N2E2_2694	0.55	+1.1
3,185,667	-		Pf6N2E2_2694	0.55	-0.3
3,185,667	-		Pf6N2E2_2694	0.55	+0.8
3,185,667	-		Pf6N2E2_2694	0.55	-0.1
3,185,667	-		Pf6N2E2_2694	0.55	+1.2
3,186,179	+		Pf6N2E2_2694	0.68	+0.4
3,186,180	-		Pf6N2E2_2694	0.68	+0.3
3,186,288	-		Pf6N2E2_2694	0.71	+1.1
3,186,444	-		Pf6N2E2_2694	0.75	+0.6
3,186,444	-		Pf6N2E2_2694	0.75	+1.7
3,186,444	-		Pf6N2E2_2694	0.75	+1.3
3,186,480	+		Pf6N2E2_2694	0.76	+0.2
3,186,570	-		Pf6N2E2_2694	0.78	-0.1
3,186,878	+		Pf6N2E2_2694	0.86	+1.2
3,187,439	+				-1.7
3,187,439	+				+0.8
3,187,440	-				+0.3
3,187,575	+				+0.7
3,187,575	+				-0.2
3,187,575	+				-0.7
3,187,576	-				-0.1
3,187,576	-				+0.6
3,187,576	-				+0.6
3,187,576	-				-0.4
3,187,591	+				-0.2
3,187,591	+				+0.0
3,187,591	+				+0.3