Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2646

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,109,642	+		Pf6N2E2_2645	0.78	+0.8
3,109,642	+		Pf6N2E2_2645	0.78	+1.7
3,109,643	-		Pf6N2E2_2645	0.78	+2.3
3,109,736	+		Pf6N2E2_2645	0.83	+0.6
3,109,736	+		Pf6N2E2_2645	0.83	+1.5
3,109,736	+		Pf6N2E2_2645	0.83	+1.8
3,109,737	-		Pf6N2E2_2645	0.83	+1.5
3,109,737	-		Pf6N2E2_2645	0.83	+1.1
3,109,737	-		Pf6N2E2_2645	0.83	+0.7
3,109,737	-		Pf6N2E2_2645	0.83	+0.3
3,109,737	-		Pf6N2E2_2645	0.83	+1.3
3,109,768	+		Pf6N2E2_2645	0.84	+1.9
3,109,769	-		Pf6N2E2_2645	0.84	+1.3
3,110,102	+				+2.1
3,110,102	+				-0.4
3,110,102	+				+1.8
3,110,102	+				+2.3
3,110,103	-				+1.2
3,110,103	-				+1.6
3,110,176	-				-0.1
3,110,176	-				-2.0
3,110,176	-				-3.1
3,110,229	+				+2.1
3,110,229	+				+0.8
3,110,414	+				+0.7
3,110,414	+				+0.1
3,110,414	+				+0.3
3,110,414	+				+1.0
3,110,415	-				-2.8
3,110,415	-				-4.2
3,110,415	-				-0.3
3,110,415	-				-4.2
3,110,415	-				-2.8
3,110,415	-				-3.3
3,110,416	+				+0.1
3,110,416	+				+0.8
3,110,416	+				-1.4
3,110,416	+				+0.4
3,110,416	+				-0.6
3,110,416	+				+0.3
3,110,416	+				+0.7
3,110,416	+				-2.4
3,110,416	+				-0.5
3,110,416	+				+0.5
3,110,416	+				+0.7
3,110,416	+				+1.2
3,110,416	+				+1.2
3,110,416	+				-0.1
3,110,416	+				+0.7
3,110,416	+				-0.1
3,110,416	+				-0.4
3,110,417	-				-2.3
3,110,417	-				-3.3
3,110,417	-				-1.4
3,110,417	-				-3.1
3,110,417	-				-4.9
3,110,417	-				-4.0
3,110,417	-				-3.0
3,110,417	-				-1.1
3,110,417	-				-3.0
3,110,417	-				-2.9
3,110,417	-				-2.8
3,110,417	-				-3.1
3,110,417	-				-3.3
3,110,417	-				-1.3
3,110,417	-				-3.0
3,110,417	-				-2.6
3,110,417	-				-3.8
3,110,417	-				-3.6
3,110,462	-				-3.7
3,110,462	-				-2.1
3,110,462	-				-2.4
3,110,534	+				+3.0
3,110,612	-		Pf6N2E2_2646	0.13	-2.4
3,110,612	-		Pf6N2E2_2646	0.13	-0.7
3,110,630	-		Pf6N2E2_2646	0.16	-1.4
3,111,171	+				+0.4
3,111,300	+		Pf6N2E2_2647	0.42	+0.5
3,111,300	+		Pf6N2E2_2647	0.42	+0.5
3,111,300	+		Pf6N2E2_2647	0.42	-0.1
3,111,301	-		Pf6N2E2_2647	0.43	-1.7
3,111,301	-		Pf6N2E2_2647	0.43	-0.8
3,111,313	+		Pf6N2E2_2647	0.46	+0.8
3,111,313	+		Pf6N2E2_2647	0.46	-0.1
3,111,348	+		Pf6N2E2_2647	0.55	+0.3
3,111,349	-		Pf6N2E2_2647	0.55	-1.2
3,111,380	+		Pf6N2E2_2647	0.63	+0.9
3,111,387	+		Pf6N2E2_2647	0.64	-0.6
3,111,388	-		Pf6N2E2_2647	0.65	-1.1
3,111,388	-		Pf6N2E2_2647	0.65	-0.8
3,111,429	+		Pf6N2E2_2647	0.75	+1.2
3,111,492	+				-0.1
3,111,492	+				-0.3
3,111,492	+				+0.6
3,111,493	-				+0.3
3,111,493	-				-0.1
3,111,493	-				+0.1
3,111,493	-				-0.4
3,111,493	-				-2.4
3,111,494	+				-0.1
3,111,494	+				+0.1
3,111,495	-				-0.5
3,111,495	-				-1.6
3,111,495	-				-0.6
3,111,495	-				+0.6
3,111,655	-				+0.8
3,111,655	-				-1.6
3,111,853	+				+1.3
3,111,854	-				+0.2
3,111,854	-				-0.7
3,111,854	-				-0.0
3,111,895	-				+1.7