Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2645

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,107,202	+				+1.5
3,107,202	+				+1.9
3,107,202	+				-2.7
3,107,202	+				-0.0
3,107,202	+				+1.1
3,107,202	+				+0.7
3,107,202	+				+1.5
3,107,202	+				+1.5
3,107,203	-				+0.6
3,107,341	-				+1.5
3,107,353	+				+2.7
3,107,363	+				+0.9
3,107,363	+				+2.8
3,107,363	+				+1.3
3,107,363	+				+0.8
3,107,363	+				+1.1
3,107,363	+				+1.5
3,107,363	+				+1.2
3,107,364	-				+1.2
3,107,364	-				+1.7
3,107,364	-				+1.2
3,107,364	-				+0.2
3,107,364	-				+2.0
3,107,364	-				+1.9
3,107,364	-				+0.8
3,107,364	-				-0.4
3,107,364	-				+1.5
3,107,367	-				+0.9
3,107,374	-				+1.7
3,107,375	+				+0.8
3,107,375	+				+0.9
3,107,375	+				-0.1
3,107,375	+				+0.7
3,107,376	-				+0.7
3,107,376	-				+2.1
3,107,376	-				-0.9
3,107,417	+				+3.0
3,107,417	+				+1.6
3,107,858	-				+3.1
3,107,944	+				+4.1
3,107,971	-				-1.1
3,108,075	+				+2.7
3,108,193	+		Pf6N2E2_2645	0.10	+3.8
3,108,193	+		Pf6N2E2_2645	0.10	+4.2
3,108,193	+		Pf6N2E2_2645	0.10	+2.7
3,108,279	+		Pf6N2E2_2645	0.14	+1.6
3,108,280	-		Pf6N2E2_2645	0.14	-3.8
3,108,321	+		Pf6N2E2_2645	0.16	+2.7
3,108,322	-		Pf6N2E2_2645	0.16	-3.4
3,108,451	+		Pf6N2E2_2645	0.22	+1.3
3,108,451	+		Pf6N2E2_2645	0.22	+2.0
3,108,452	-		Pf6N2E2_2645	0.22	-4.2
3,108,659	-		Pf6N2E2_2645	0.32	-3.3
3,108,709	-		Pf6N2E2_2645	0.34	-3.2
3,108,808	-		Pf6N2E2_2645	0.39	-4.0
3,109,166	-		Pf6N2E2_2645	0.56	-1.3
3,109,166	-		Pf6N2E2_2645	0.56	-2.1
3,109,166	-		Pf6N2E2_2645	0.56	-2.1
3,109,168	+		Pf6N2E2_2645	0.56	+2.8
3,109,168	+		Pf6N2E2_2645	0.56	+1.6
3,109,168	+		Pf6N2E2_2645	0.56	+2.1
3,109,169	-		Pf6N2E2_2645	0.56	-0.8
3,109,402	+		Pf6N2E2_2645	0.67	+2.0
3,109,402	+		Pf6N2E2_2645	0.67	-0.5
3,109,474	-		Pf6N2E2_2645	0.70	+0.9
3,109,642	+		Pf6N2E2_2645	0.78	+0.8
3,109,642	+		Pf6N2E2_2645	0.78	+1.7
3,109,643	-		Pf6N2E2_2645	0.78	+2.3
3,109,736	+		Pf6N2E2_2645	0.83	+0.6
3,109,736	+		Pf6N2E2_2645	0.83	+1.5
3,109,736	+		Pf6N2E2_2645	0.83	+1.8
3,109,737	-		Pf6N2E2_2645	0.83	+1.5
3,109,737	-		Pf6N2E2_2645	0.83	+1.1
3,109,737	-		Pf6N2E2_2645	0.83	+0.7
3,109,737	-		Pf6N2E2_2645	0.83	+0.3
3,109,737	-		Pf6N2E2_2645	0.83	+1.3
3,109,768	+		Pf6N2E2_2645	0.84	+1.9
3,109,769	-		Pf6N2E2_2645	0.84	+1.3
3,110,102	+				+2.1
3,110,102	+				-0.4
3,110,102	+				+1.8
3,110,102	+				+2.3
3,110,103	-				+1.2
3,110,103	-				+1.6
3,110,176	-				-0.1
3,110,176	-				-2.0
3,110,176	-				-3.1
3,110,229	+				+2.1
3,110,229	+				+0.8
3,110,414	+				+0.7
3,110,414	+				+0.1
3,110,414	+				+0.3
3,110,414	+				+1.0
3,110,415	-				-2.8
3,110,415	-				-4.2
3,110,415	-				-0.3
3,110,415	-				-4.2
3,110,415	-				-2.8
3,110,415	-				-3.3
3,110,416	+				+0.1
3,110,416	+				+0.8
3,110,416	+				-1.4
3,110,416	+				+0.4
3,110,416	+				-0.6
3,110,416	+				+0.3
3,110,416	+				+0.7
3,110,416	+				-2.4
3,110,416	+				-0.5
3,110,416	+				+0.5
3,110,416	+				+0.7
3,110,416	+				+1.2
3,110,416	+				+1.2
3,110,416	+				-0.1
3,110,416	+				+0.7
3,110,416	+				-0.1
3,110,416	+				-0.4
3,110,417	-				-2.3
3,110,417	-				-3.3
3,110,417	-				-1.4
3,110,417	-				-3.1
3,110,417	-				-4.9
3,110,417	-				-4.0
3,110,417	-				-3.0
3,110,417	-				-1.1
3,110,417	-				-3.0
3,110,417	-				-2.9
3,110,417	-				-2.8
3,110,417	-				-3.1
3,110,417	-				-3.3
3,110,417	-				-1.3
3,110,417	-				-3.0
3,110,417	-				-2.6
3,110,417	-				-3.8
3,110,417	-				-3.6
3,110,462	-				-3.7
3,110,462	-				-2.1
3,110,462	-				-2.4
3,110,534	+				+3.0
3,110,612	-		Pf6N2E2_2646	0.13	-2.4
3,110,612	-		Pf6N2E2_2646	0.13	-0.7
3,110,630	-		Pf6N2E2_2646	0.16	-1.4