Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2479

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,925,187	+		Pf6N2E2_2478	0.62	+2.0
2,925,257	+		Pf6N2E2_2478	0.64	+0.5
2,925,635	+		Pf6N2E2_2478	0.80	+0.9
2,925,635	+		Pf6N2E2_2478	0.80	-1.3
2,925,635	+		Pf6N2E2_2478	0.80	-0.7
2,925,635	+		Pf6N2E2_2478	0.80	-1.5
2,925,635	+		Pf6N2E2_2478	0.80	+0.6
2,925,636	-		Pf6N2E2_2478	0.80	-0.3
2,925,650	+		Pf6N2E2_2478	0.80	+0.0
2,925,782	+		Pf6N2E2_2478	0.85	-0.4
2,925,782	+		Pf6N2E2_2478	0.85	-1.2
2,925,782	+		Pf6N2E2_2478	0.85	-0.2
2,925,782	+		Pf6N2E2_2478	0.85	-0.7
2,925,782	+		Pf6N2E2_2478	0.85	-0.8
2,925,783	-		Pf6N2E2_2478	0.85	-1.0
2,925,783	-		Pf6N2E2_2478	0.85	+0.5
2,925,783	-		Pf6N2E2_2478	0.85	-0.2
2,925,783	-		Pf6N2E2_2478	0.85	-1.2
2,925,783	-		Pf6N2E2_2478	0.85	-1.4
2,925,783	-		Pf6N2E2_2478	0.85	-1.3
2,925,783	-		Pf6N2E2_2478	0.85	-0.6
2,925,858	+				-0.2
2,925,858	+		Pf6N2E2_2478	0.88	-0.2
2,925,859	-		Pf6N2E2_2478	0.88	-1.2
2,925,874	-		Pf6N2E2_2478	0.89	-0.4
2,926,131	+				-0.2
2,926,131	+				+1.6
2,926,148	+				+0.2
2,926,148	+				+0.5
2,926,148	+				-0.6
2,926,168	+				-2.5
2,926,169	-				-1.1
2,926,169	-				+0.5
2,926,169	-				+1.3
2,926,169	-				-1.7
2,926,350	+		Pf6N2E2_2479	0.34	-0.4
2,926,350	+		Pf6N2E2_2479	0.34	-1.3
2,926,350	+		Pf6N2E2_2479	0.34	-3.9
2,926,350	+		Pf6N2E2_2479	0.34	-1.5
2,926,357	-		Pf6N2E2_2479	0.35	+0.0
2,926,464	+		Pf6N2E2_2479	0.57	-1.7
2,926,465	-		Pf6N2E2_2479	0.57	-1.4
2,926,653	+				-0.9
2,926,654	-				+0.4
2,926,654	-				+0.8
2,926,672	-				+1.3
2,926,864	+		Pf6N2E2_2480	0.68	+1.4
2,926,864	+		Pf6N2E2_2480	0.68	-2.0
2,926,973	+				-0.4
2,926,973	+				+0.6
2,926,973	+				-0.0
2,926,973	+				-0.6
2,926,973	+				-0.4
2,926,973	+				-0.9
2,926,973	+				-1.3
2,926,973	+				-0.7
2,926,974	-				-0.3
2,926,974	-				+0.1
2,926,974	-				-0.2
2,926,974	-				-4.0
2,927,107	+				+0.3
2,927,107	+				-0.2
2,927,130	+				-0.2
2,927,130	+				-0.2
2,927,130	+				+0.1
2,927,131	-				-1.7
2,927,131	-				-1.7
2,927,162	+				+0.0
2,927,162	+				-0.4
2,927,214	-				-0.1
2,927,305	-		Pf6N2E2_2481	0.14	-1.0
2,927,337	-		Pf6N2E2_2481	0.21	-0.4
2,927,599	+		Pf6N2E2_2481	0.81	-1.7
2,927,599	+		Pf6N2E2_2481	0.81	-0.3
2,927,599	+		Pf6N2E2_2481	0.81	-0.6
2,927,600	-		Pf6N2E2_2481	0.82	+1.2
2,927,600	-		Pf6N2E2_2481	0.82	+0.1
2,927,661	+				+0.1
2,927,662	-				-1.0
2,927,662	-				+0.2