Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2476

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,921,469	+		Pf6N2E2_2474	0.63	-3.2
2,921,469	+		Pf6N2E2_2474	0.63	-2.3
2,921,470	-		Pf6N2E2_2474	0.63	-1.1
2,921,470	-		Pf6N2E2_2474	0.63	-4.2
2,921,497	-		Pf6N2E2_2474	0.66	-1.5
2,921,497	-		Pf6N2E2_2474	0.66	-2.3
2,921,497	-		Pf6N2E2_2474	0.66	+0.6
2,921,499	+		Pf6N2E2_2474	0.66	-1.5
2,921,500	-		Pf6N2E2_2474	0.66	-1.5
2,921,640	+		Pf6N2E2_2474	0.81	-0.6
2,921,652	+		Pf6N2E2_2474	0.82	-1.2
2,921,652	+		Pf6N2E2_2474	0.82	-2.7
2,921,653	-		Pf6N2E2_2474	0.82	-2.0
2,921,653	-		Pf6N2E2_2474	0.82	-2.0
2,921,653	-		Pf6N2E2_2474	0.82	-1.3
2,921,653	-		Pf6N2E2_2474	0.82	-0.9
2,921,653	-		Pf6N2E2_2474	0.82	-1.6
2,921,653	-		Pf6N2E2_2474	0.82	-1.2
2,921,685	+		Pf6N2E2_2474	0.85	-1.1
2,921,685	+		Pf6N2E2_2474	0.85	-2.7
2,921,685	+		Pf6N2E2_2474	0.85	-1.6
2,921,773	+				-2.5
2,921,877	+				-1.9
2,921,877	+				-0.5
2,921,878	-				-0.4
2,921,878	-				+0.2
2,921,878	-				-0.6
2,921,878	-				-0.8
2,921,878	-				+0.6
2,921,892	+				-1.2
2,921,893	-				-1.0
2,921,996	-				-1.0
2,921,996	-				-0.5
2,921,996	-				+0.1
2,922,372	-				+1.1
2,922,372	-				+0.6
2,922,372	-				-1.7
2,922,507	+		Pf6N2E2_2476	0.27	-1.7
2,922,508	-		Pf6N2E2_2476	0.27	-1.3
2,922,532	-		Pf6N2E2_2476	0.31	-1.7
2,922,543	+		Pf6N2E2_2476	0.33	-2.0
2,922,775	+		Pf6N2E2_2476	0.71	-0.2
2,922,859	+		Pf6N2E2_2476	0.85	-0.7
2,922,860	-		Pf6N2E2_2476	0.85	-0.2
2,922,884	-		Pf6N2E2_2476	0.89	+0.4
2,922,992	+				+0.1
2,923,181	+		Pf6N2E2_2477	0.32	+0.1
2,923,181	+		Pf6N2E2_2477	0.32	-0.2
2,923,597	+				-1.3
2,923,762	+				-0.1
2,923,776	-				+0.2