Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2453

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,903,482	-				+2.5
2,903,679	+		Pf6N2E2_2452	0.23	-0.4
2,903,680	-		Pf6N2E2_2452	0.23	-0.9
2,903,680	-		Pf6N2E2_2452	0.23	+1.2
2,903,827	+		Pf6N2E2_2452	0.43	-0.2
2,903,830	-		Pf6N2E2_2452	0.43	+0.3
2,903,901	+		Pf6N2E2_2452	0.53	-0.2
2,903,901	+		Pf6N2E2_2452	0.53	-0.6
2,903,901	+		Pf6N2E2_2452	0.53	-0.7
2,903,902	-		Pf6N2E2_2452	0.53	-1.0
2,903,902	-		Pf6N2E2_2452	0.53	-0.5
2,903,902	-		Pf6N2E2_2452	0.53	-0.1
2,903,931	+		Pf6N2E2_2452	0.56	+0.2
2,904,022	+		Pf6N2E2_2452	0.69	+0.3
2,904,023	-		Pf6N2E2_2452	0.69	+0.3
2,904,023	-		Pf6N2E2_2452	0.69	-0.4
2,904,023	-		Pf6N2E2_2452	0.69	-1.2
2,904,097	+		Pf6N2E2_2452	0.78	-2.8
2,904,099	+		Pf6N2E2_2452	0.79	-0.9
2,904,099	+		Pf6N2E2_2452	0.79	+2.6
2,904,099	+		Pf6N2E2_2452	0.79	-0.7
2,904,099	+		Pf6N2E2_2452	0.79	+0.5
2,904,099	+		Pf6N2E2_2452	0.79	+0.4
2,904,099	+		Pf6N2E2_2452	0.79	-2.5
2,904,100	-		Pf6N2E2_2452	0.79	+0.7
2,904,100	-		Pf6N2E2_2452	0.79	+1.1
2,904,100	-		Pf6N2E2_2452	0.79	-0.2
2,904,100	-		Pf6N2E2_2452	0.79	+1.9
2,904,100	-		Pf6N2E2_2452	0.79	-0.5
2,904,106	-		Pf6N2E2_2452	0.80	+1.6
2,904,352	+				+0.0
2,904,353	-				-0.8
2,904,363	+				+0.6
2,904,391	+				+0.7
2,904,392	-				+1.4
2,904,874	-		Pf6N2E2_2453	0.35	-0.4
2,904,874	-		Pf6N2E2_2453	0.35	-0.6
2,904,996	+		Pf6N2E2_2453	0.44	-0.3
2,905,119	+		Pf6N2E2_2453	0.53	-0.2
2,905,120	-		Pf6N2E2_2453	0.53	-0.1
2,905,162	-		Pf6N2E2_2453	0.57	+1.2
2,905,164	+		Pf6N2E2_2453	0.57	+0.4
2,905,164	+		Pf6N2E2_2453	0.57	-1.5
2,905,164	+		Pf6N2E2_2453	0.57	-1.2
2,905,165	-		Pf6N2E2_2453	0.57	+2.1
2,905,300	+		Pf6N2E2_2453	0.67	+0.2
2,905,300	+		Pf6N2E2_2453	0.67	-0.4
2,905,301	-		Pf6N2E2_2453	0.67	+1.1
2,905,301	-		Pf6N2E2_2453	0.67	+0.7
2,905,301	-		Pf6N2E2_2453	0.67	+0.5
2,905,301	-		Pf6N2E2_2453	0.67	-1.0
2,905,485	+		Pf6N2E2_2453	0.80	+0.4
2,905,560	+		Pf6N2E2_2453	0.86	+0.6
2,905,560	+		Pf6N2E2_2453	0.86	+0.0
2,905,561	-		Pf6N2E2_2453	0.86	+0.7
2,905,561	-		Pf6N2E2_2453	0.86	-1.0
2,905,561	-		Pf6N2E2_2453	0.86	+0.4
2,905,889	+				-0.3
2,905,889	+				-0.7
2,905,890	-				+1.2
2,905,890	-				-0.5
2,905,890	-				+0.9
2,905,940	-				+0.8
2,905,940	-				+0.2
2,905,940	-				-1.0
2,906,130	+		Pf6N2E2_2454	0.21	+0.9
2,906,130	+		Pf6N2E2_2454	0.21	+1.0
2,906,130	+		Pf6N2E2_2454	0.21	+0.6
2,906,131	-		Pf6N2E2_2454	0.21	-0.4
2,906,131	-		Pf6N2E2_2454	0.21	+0.0
2,906,131	-		Pf6N2E2_2454	0.21	+0.4
2,906,133	+		Pf6N2E2_2454	0.21	-0.4
2,906,134	-		Pf6N2E2_2454	0.21	-0.1
2,906,134	-		Pf6N2E2_2454	0.21	+0.6
2,906,139	+		Pf6N2E2_2454	0.21	+0.3
2,906,139	+		Pf6N2E2_2454	0.21	+0.7
2,906,139	+		Pf6N2E2_2454	0.21	-0.6
2,906,139	+		Pf6N2E2_2454	0.21	-0.3
2,906,139	+		Pf6N2E2_2454	0.21	-0.9
2,906,139	+		Pf6N2E2_2454	0.21	-1.4
2,906,140	-		Pf6N2E2_2454	0.21	+0.8
2,906,140	-		Pf6N2E2_2454	0.21	+1.0
2,906,140	-		Pf6N2E2_2454	0.21	-0.8
2,906,140	-		Pf6N2E2_2454	0.21	+1.2
2,906,140	-		Pf6N2E2_2454	0.21	+0.2
2,906,163	+		Pf6N2E2_2454	0.23	+1.8
2,906,163	+		Pf6N2E2_2454	0.23	+0.8
2,906,163	+		Pf6N2E2_2454	0.23	+0.5
2,906,163	+		Pf6N2E2_2454	0.23	-0.6
2,906,163	+		Pf6N2E2_2454	0.23	+0.9
2,906,163	+		Pf6N2E2_2454	0.23	+1.8
2,906,163	+		Pf6N2E2_2454	0.23	+0.1
2,906,163	+		Pf6N2E2_2454	0.23	-1.0
2,906,163	+		Pf6N2E2_2454	0.23	-2.8
2,906,163	+		Pf6N2E2_2454	0.23	+0.2
2,906,163	+		Pf6N2E2_2454	0.23	+0.9
2,906,164	-		Pf6N2E2_2454	0.23	+0.7
2,906,164	-		Pf6N2E2_2454	0.23	-1.2
2,906,164	-		Pf6N2E2_2454	0.23	+0.3
2,906,164	-		Pf6N2E2_2454	0.23	+1.4
2,906,164	-		Pf6N2E2_2454	0.23	-0.8
2,906,164	-		Pf6N2E2_2454	0.23	+0.5
2,906,164	-		Pf6N2E2_2454	0.23	+0.8
2,906,394	+		Pf6N2E2_2454	0.42	-0.9
2,906,510	+		Pf6N2E2_2454	0.51	-1.4
2,906,529	+		Pf6N2E2_2454	0.53	+1.2
2,906,530	-		Pf6N2E2_2454	0.53	+0.1
2,906,530	-		Pf6N2E2_2454	0.53	-0.2
2,906,530	-		Pf6N2E2_2454	0.53	-0.2
2,906,530	-		Pf6N2E2_2454	0.53	+0.4
2,906,647	+		Pf6N2E2_2454	0.63	-1.3
2,906,648	-		Pf6N2E2_2454	0.63	-1.2
2,906,748	+		Pf6N2E2_2454	0.71	-1.2
2,906,748	+		Pf6N2E2_2454	0.71	+1.0
2,906,748	+		Pf6N2E2_2454	0.71	-0.2