Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2386

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,823,355	-		Pf6N2E2_2384	0.18	+0.1
2,823,370	-		Pf6N2E2_2384	0.20	-0.2
2,823,370	-		Pf6N2E2_2384	0.20	-0.8
2,823,370	-		Pf6N2E2_2384	0.20	+2.3
2,823,518	-		Pf6N2E2_2384	0.38	+1.8
2,823,518	-		Pf6N2E2_2384	0.38	+1.1
2,823,518	-		Pf6N2E2_2384	0.38	+1.3
2,823,689	-		Pf6N2E2_2384	0.59	-1.8
2,823,756	-		Pf6N2E2_2384	0.67	-2.5
2,823,756	-		Pf6N2E2_2384	0.67	+1.0
2,823,756	-		Pf6N2E2_2384	0.67	-0.1
2,823,965	-				-1.4
2,823,965	-				+1.2
2,823,969	-				+0.5
2,824,030	+				-1.8
2,824,031	-				-0.2
2,824,045	-				-0.5
2,824,060	-		Pf6N2E2_2385	0.11	-1.2
2,824,523	+		Pf6N2E2_2386	0.18	-2.2
2,824,523	+		Pf6N2E2_2386	0.18	-2.0
2,824,524	-		Pf6N2E2_2386	0.18	+0.1
2,824,650	-		Pf6N2E2_2386	0.31	-1.2
2,824,787	+		Pf6N2E2_2386	0.45	-1.7
2,824,787	+		Pf6N2E2_2386	0.45	-1.2
2,824,788	-		Pf6N2E2_2386	0.45	+0.0
2,824,788	-		Pf6N2E2_2386	0.45	+0.4
2,824,788	-		Pf6N2E2_2386	0.45	-0.7
2,824,886	+		Pf6N2E2_2386	0.55	-0.0
2,824,887	-		Pf6N2E2_2386	0.55	-0.9
2,825,356	+				-1.6
2,825,356	+				-1.5
2,825,357	-				+0.4
2,825,419	-		Pf6N2E2_2387	0.11	-0.3
2,825,419	-		Pf6N2E2_2387	0.11	+3.1
2,825,419	-		Pf6N2E2_2387	0.11	-0.9
2,825,419	-		Pf6N2E2_2387	0.11	-0.3
2,825,424	+		Pf6N2E2_2387	0.12	-3.0
2,825,424	+		Pf6N2E2_2387	0.12	-2.3
2,825,424	+		Pf6N2E2_2387	0.12	-1.3
2,825,425	-		Pf6N2E2_2387	0.13	-0.2
2,825,425	-		Pf6N2E2_2387	0.13	-0.4
2,825,574	+		Pf6N2E2_2387	0.43	-1.2
2,825,844	+				-1.1
2,825,845	-				+1.3
2,825,930	-				-1.0
2,825,930	-				-0.3