Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2278

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,692,865	+		Pf6N2E2_2277	0.55	+0.2
2,692,874	+		Pf6N2E2_2277	0.56	+1.0
2,692,874	+		Pf6N2E2_2277	0.56	+2.0
2,693,582	-				+1.4
2,693,582	-				+1.3
2,693,686	+				+0.9
2,693,769	+				+0.9
2,693,769	+				+0.9
2,693,769	+				-0.7
2,693,770	-				-0.0
2,693,770	-				+0.4
2,693,960	-				+0.9
2,693,960	-				+0.3
2,694,061	-				+1.1
2,694,061	-				+0.5
2,694,068	+				-0.8
2,694,069	-				+0.6
2,694,069	-				+1.5
2,694,196	+		Pf6N2E2_2278	0.14	+0.3
2,694,197	-		Pf6N2E2_2278	0.14	+0.4
2,694,505	+		Pf6N2E2_2278	0.23	-0.1
2,694,505	+		Pf6N2E2_2278	0.23	+0.7
2,694,505	+		Pf6N2E2_2278	0.23	+0.2
2,694,505	+		Pf6N2E2_2278	0.23	+1.8
2,694,506	-		Pf6N2E2_2278	0.23	+0.8
2,694,506	-		Pf6N2E2_2278	0.23	+0.6
2,694,548	-		Pf6N2E2_2278	0.24	+1.0
2,694,548	-		Pf6N2E2_2278	0.24	+0.5
2,694,548	-		Pf6N2E2_2278	0.24	+1.6
2,694,665	+		Pf6N2E2_2278	0.27	+0.6
2,694,666	-		Pf6N2E2_2278	0.27	+0.5
2,694,666	-		Pf6N2E2_2278	0.27	+0.1
2,694,669	-		Pf6N2E2_2278	0.27	+0.6
2,695,037	+		Pf6N2E2_2278	0.38	+1.7
2,695,037	+		Pf6N2E2_2278	0.38	+0.3
2,695,037	+		Pf6N2E2_2278	0.38	+0.8
2,695,037	+		Pf6N2E2_2278	0.38	+1.1
2,695,038	-		Pf6N2E2_2278	0.38	+0.0
2,695,038	-		Pf6N2E2_2278	0.38	+1.8
2,695,291	+		Pf6N2E2_2278	0.45	+0.6
2,695,291	+		Pf6N2E2_2278	0.45	+0.0
2,695,291	+		Pf6N2E2_2278	0.45	+0.5
2,695,291	+		Pf6N2E2_2278	0.45	+0.1
2,695,291	+		Pf6N2E2_2278	0.45	+0.1
2,695,291	+		Pf6N2E2_2278	0.45	+0.9
2,695,291	+		Pf6N2E2_2278	0.45	+1.1
2,695,292	-		Pf6N2E2_2278	0.45	+1.1
2,695,292	-		Pf6N2E2_2278	0.45	+0.3
2,695,292	-		Pf6N2E2_2278	0.45	+1.4
2,695,447	+		Pf6N2E2_2278	0.50	+1.0
2,695,447	+		Pf6N2E2_2278	0.50	+0.4
2,695,447	+		Pf6N2E2_2278	0.50	-1.0
2,695,447	+		Pf6N2E2_2278	0.50	+0.6
2,695,447	+		Pf6N2E2_2278	0.50	+1.3
2,695,447	+		Pf6N2E2_2278	0.50	-0.1
2,695,447	+		Pf6N2E2_2278	0.50	+0.8
2,695,447	+		Pf6N2E2_2278	0.50	-0.1
2,695,447	+		Pf6N2E2_2278	0.50	+0.2
2,695,447	+		Pf6N2E2_2278	0.50	+0.6
2,695,447	+		Pf6N2E2_2278	0.50	+1.3
2,695,448	-		Pf6N2E2_2278	0.50	+1.3
2,695,448	-		Pf6N2E2_2278	0.50	+0.8
2,695,448	-		Pf6N2E2_2278	0.50	+0.8
2,695,448	-		Pf6N2E2_2278	0.50	-0.2
2,695,448	-		Pf6N2E2_2278	0.50	+2.3
2,695,448	-		Pf6N2E2_2278	0.50	+1.5
2,695,448	-		Pf6N2E2_2278	0.50	+0.6
2,695,502	-		Pf6N2E2_2278	0.51	+0.3
2,695,729	+		Pf6N2E2_2278	0.58	+1.1
2,695,729	+		Pf6N2E2_2278	0.58	-0.1
2,695,729	+		Pf6N2E2_2278	0.58	+1.0
2,695,729	+		Pf6N2E2_2278	0.58	+0.7
2,695,730	-		Pf6N2E2_2278	0.58	+1.4
2,695,730	-		Pf6N2E2_2278	0.58	+1.0
2,696,170	+		Pf6N2E2_2278	0.71	+1.9
2,696,170	+		Pf6N2E2_2278	0.71	-1.4
2,696,170	+		Pf6N2E2_2278	0.71	+0.6
2,696,170	+		Pf6N2E2_2278	0.71	+0.8
2,696,171	-		Pf6N2E2_2278	0.71	+1.4
2,696,171	-		Pf6N2E2_2278	0.71	+1.1
2,696,171	-		Pf6N2E2_2278	0.71	-1.6
2,696,171	-		Pf6N2E2_2278	0.71	+2.5
2,696,171	-		Pf6N2E2_2278	0.71	-1.4
2,696,173	+		Pf6N2E2_2278	0.71	+0.7
2,696,173	+		Pf6N2E2_2278	0.71	+0.9
2,696,173	+		Pf6N2E2_2278	0.71	+0.9
2,696,173	+		Pf6N2E2_2278	0.71	+1.5
2,696,174	-		Pf6N2E2_2278	0.71	-1.4
2,696,174	-		Pf6N2E2_2278	0.71	+1.2
2,696,174	-		Pf6N2E2_2278	0.71	-0.6
2,696,174	-		Pf6N2E2_2278	0.71	+1.8
2,696,174	-		Pf6N2E2_2278	0.71	+0.1
2,696,174	-		Pf6N2E2_2278	0.71	+0.2
2,696,305	+		Pf6N2E2_2278	0.75	+0.2
2,696,305	+		Pf6N2E2_2278	0.75	-2.7
2,696,306	-		Pf6N2E2_2278	0.75	+2.0
2,696,306	-		Pf6N2E2_2278	0.75	+2.0
2,696,464	+		Pf6N2E2_2278	0.79	+0.8
2,696,464	+		Pf6N2E2_2278	0.79	-2.2
2,696,464	+		Pf6N2E2_2278	0.79	+0.7
2,696,465	-		Pf6N2E2_2278	0.79	+2.0
2,696,470	+		Pf6N2E2_2278	0.79	+1.1
2,696,470	+		Pf6N2E2_2278	0.79	+1.3
2,696,470	+		Pf6N2E2_2278	0.79	-0.1
2,696,470	+		Pf6N2E2_2278	0.79	+1.0
2,696,470	+		Pf6N2E2_2278	0.79	-0.7
2,696,471	-		Pf6N2E2_2278	0.80	+0.7
2,696,471	-		Pf6N2E2_2278	0.80	+0.5
2,696,471	-		Pf6N2E2_2278	0.80	+1.8
2,696,471	-		Pf6N2E2_2278	0.80	+0.3
2,696,656	+		Pf6N2E2_2278	0.85	+2.3
2,696,657	-		Pf6N2E2_2278	0.85	+0.8
2,696,657	-		Pf6N2E2_2278	0.85	+1.3
2,696,657	-		Pf6N2E2_2278	0.85	+0.7
2,696,779	+		Pf6N2E2_2278	0.88	+1.3
2,696,779	+		Pf6N2E2_2278	0.88	+0.0
2,697,258	-		Pf6N2E2_2279	0.12	-1.8
2,697,419	+		Pf6N2E2_2279	0.41	-0.3
2,697,420	-		Pf6N2E2_2279	0.41	-3.0
2,697,420	-		Pf6N2E2_2279	0.41	-0.2
2,697,427	-		Pf6N2E2_2279	0.42	-0.3
2,697,640	+		Pf6N2E2_2279	0.80	-0.0
2,697,640	+		Pf6N2E2_2279	0.80	+1.6
2,698,152	-		Pf6N2E2_2280	0.14	+1.4