Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2274

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,687,055	-				+0.5
2,687,060	+				-1.0
2,687,061	-				-0.6
2,687,061	-				-1.0
2,687,084	+				+0.5
2,687,084	+				+0.2
2,687,084	+				-0.0
2,687,084	+				-0.8
2,687,084	+				+0.7
2,687,085	-				+1.2
2,687,160	+		Pf6N2E2_2273	0.12	-0.8
2,687,161	-		Pf6N2E2_2273	0.12	-0.2
2,687,291	+		Pf6N2E2_2273	0.30	-0.3
2,687,291	+		Pf6N2E2_2273	0.30	+0.4
2,687,291	+		Pf6N2E2_2273	0.30	-0.3
2,687,291	+		Pf6N2E2_2273	0.30	+0.2
2,687,292	-		Pf6N2E2_2273	0.30	-0.0
2,687,292	-		Pf6N2E2_2273	0.30	+0.8
2,687,292	-		Pf6N2E2_2273	0.30	+0.3
2,687,292	-		Pf6N2E2_2273	0.30	-0.1
2,687,597	+		Pf6N2E2_2273	0.73	+0.5
2,687,598	-		Pf6N2E2_2273	0.73	+1.1
2,687,749	+				+0.2
2,687,749	+				+0.9
2,687,862	+				-3.2
2,687,863	-				-0.2
2,688,018	-		Pf6N2E2_2274	0.13	-0.8
2,688,186	+		Pf6N2E2_2274	0.25	-1.6
2,688,187	-		Pf6N2E2_2274	0.25	-1.6
2,688,187	-		Pf6N2E2_2274	0.25	-1.0
2,688,238	+		Pf6N2E2_2274	0.29	-2.3
2,688,239	-		Pf6N2E2_2274	0.29	-2.1
2,688,315	+		Pf6N2E2_2274	0.34	+0.8
2,688,316	-		Pf6N2E2_2274	0.34	-0.7
2,688,316	-		Pf6N2E2_2274	0.34	-1.2
2,688,316	-		Pf6N2E2_2274	0.34	-2.5
2,688,327	-		Pf6N2E2_2274	0.35	-2.8
2,688,335	-		Pf6N2E2_2274	0.36	-3.5
2,688,335	-		Pf6N2E2_2274	0.36	-3.0
2,689,216	-				+2.3
2,689,221	+				+0.2
2,689,235	+				-1.5
2,689,235	+				+0.2
2,689,236	-				-1.5
2,689,344	+				-2.1
2,689,344	+				-2.5
2,689,344	+				-1.2
2,689,345	-				+0.8
2,689,345	-				+0.1
2,689,345	-				+0.5
2,689,345	-				+0.3
2,689,345	-				-0.0
2,689,345	-				+0.2
2,689,347	-				+1.1
2,689,347	-				-0.4
2,689,347	-				+0.7
2,689,347	-				+1.1
2,689,347	-				+0.9
2,689,347	-				+1.5
2,689,389	-				-0.8
2,689,408	+				-1.0
2,689,422	+				+0.3
2,689,423	-				+0.2
2,689,560	-				-1.9
2,689,560	-				-0.2
2,689,560	-				-0.0
2,689,687	+		Pf6N2E2_2275	0.11	-0.2
2,689,688	-		Pf6N2E2_2275	0.11	+1.5
2,689,788	+		Pf6N2E2_2275	0.21	+0.9
2,689,788	+		Pf6N2E2_2275	0.21	+2.0
2,689,788	+		Pf6N2E2_2275	0.21	-0.1
2,689,789	-		Pf6N2E2_2275	0.21	+0.3
2,689,789	-		Pf6N2E2_2275	0.21	+0.4
2,689,852	+		Pf6N2E2_2275	0.28	-1.0
2,689,853	-		Pf6N2E2_2275	0.28	+1.5
2,689,856	+		Pf6N2E2_2275	0.28	-0.2
2,689,856	+		Pf6N2E2_2275	0.28	+0.4
2,689,856	+		Pf6N2E2_2275	0.28	-0.3
2,689,857	-		Pf6N2E2_2275	0.28	+1.1
2,690,014	+		Pf6N2E2_2275	0.44	+0.7
2,690,014	+		Pf6N2E2_2275	0.44	+0.6
2,690,015	-		Pf6N2E2_2275	0.44	+0.7
2,690,015	-		Pf6N2E2_2275	0.44	+1.5
2,690,191	-		Pf6N2E2_2275	0.62	+1.0