Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2267

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,680,193	-				-1.2
2,680,193	-				+0.6
2,680,193	-				-1.2
2,680,243	+				-0.3
2,680,243	+				+0.4
2,680,243	+				-0.2
2,680,243	+				+0.0
2,680,243	+				-2.2
2,680,243	+				+1.8
2,680,243	+				-1.5
2,680,243	+				+0.8
2,680,244	-				+0.2
2,680,244	-				-0.7
2,680,244	-				-0.9
2,680,244	-				+1.9
2,680,244	-				+0.6
2,680,244	-				+0.1
2,680,244	-				+0.2
2,680,244	-				-0.2
2,680,244	-				+0.2
2,680,244	-				+1.3
2,680,249	+				+0.9
2,680,250	-				-0.8
2,680,250	-				-0.1
2,680,250	-				+1.0
2,680,262	+				-0.8
2,680,262	+				-0.1
2,680,262	+				+0.8
2,680,262	+				-0.2
2,680,263	-				-1.0
2,680,263	-				+0.6
2,680,263	-				+1.8
2,680,263	-				-0.3
2,680,286	+				+0.8
2,680,286	+				-0.5
2,680,286	+				+0.5
2,680,287	-				-0.4
2,680,323	+				-0.6
2,680,323	+				-0.4
2,680,323	+				-1.1
2,680,323	+				+0.0
2,680,323	+				-0.6
2,680,323	+				-1.3
2,680,324	-				-0.2
2,680,324	-				+0.4
2,680,324	-				+1.6
2,680,364	+				+0.9
2,680,364	+				-0.8
2,680,365	-				+0.3
2,680,365	-				+0.3
2,680,365	-				-0.1
2,680,365	-				-0.9
2,680,378	+				+1.5
2,680,378	+				-1.1
2,680,443	+				-0.5
2,680,444	-				+1.1
2,680,533	+		Pf6N2E2_2266	0.19	+0.2
2,680,616	+		Pf6N2E2_2266	0.32	+0.4
2,680,617	-		Pf6N2E2_2266	0.32	+0.1
2,680,692	+		Pf6N2E2_2266	0.43	-1.3
2,680,693	-		Pf6N2E2_2266	0.43	-1.5
2,680,693	-				+0.4
2,681,055	+				+0.6
2,681,055	+				+0.0
2,681,055	+				+1.6
2,681,055	+				+0.4
2,681,055	+				+0.0
2,681,055	+				+0.4
2,681,056	-				-0.7
2,681,056	-				-1.0
2,681,056	-				+0.7
2,681,352	-		Pf6N2E2_2267	0.20	+0.2
2,681,799	+		Pf6N2E2_2267	0.53	-0.9
2,681,800	-		Pf6N2E2_2267	0.53	+0.9
2,681,800	-		Pf6N2E2_2267	0.53	+0.5
2,681,800	-		Pf6N2E2_2267	0.53	-0.1
2,681,939	+		Pf6N2E2_2267	0.63	-1.3
2,681,939	+		Pf6N2E2_2267	0.63	-0.6
2,682,084	+		Pf6N2E2_2267	0.74	-0.2
2,682,346	+				-0.5
2,682,346	+				+0.8
2,682,408	+				+3.7
2,682,409	-				-0.4
2,682,409	-				-0.8
2,682,489	+				+1.2
2,682,490	-				+0.5