Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2233

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,644,465	+		Pf6N2E2_2231	0.66	+2.0
2,644,465	+		Pf6N2E2_2231	0.66	-0.2
2,644,466	-		Pf6N2E2_2231	0.67	+0.2
2,644,466	-		Pf6N2E2_2231	0.67	+0.1
2,644,619	+				-0.8
2,644,619	+				+2.1
2,644,620	-				+0.8
2,644,620	-				+0.4
2,644,629	+				+1.6
2,644,629	+				-2.2
2,644,629	+				+0.1
2,644,629	+				+1.2
2,644,630	-				-0.6
2,644,630	-				-2.2
2,644,630	-				+0.6
2,644,630	-				+0.2
2,644,684	+				-0.4
2,644,684	+				-1.2
2,644,685	-				-0.3
2,644,686	+				-0.2
2,644,686	+				+0.4
2,644,686	+				-0.4
2,644,686	+				+0.2
2,644,687	-				+0.0
2,644,687	-				-0.3
2,644,687	-				+0.4
2,644,716	+				+0.9
2,644,753	+				+0.5
2,644,754	-				-0.5
2,644,871	+		Pf6N2E2_2232	0.16	+0.7
2,644,993	+		Pf6N2E2_2232	0.35	-1.3
2,645,124	+		Pf6N2E2_2232	0.55	+0.3
2,645,125	-		Pf6N2E2_2232	0.55	+0.1
2,645,252	+		Pf6N2E2_2232	0.75	+0.5
2,645,252	+		Pf6N2E2_2232	0.75	+0.1
2,645,252	+		Pf6N2E2_2232	0.75	+0.5
2,645,253	-		Pf6N2E2_2232	0.75	-0.1
2,645,253	-		Pf6N2E2_2232	0.75	+0.3
2,645,411	+				+0.8
2,645,411	+				-0.0
2,645,412	-				+0.8
2,645,422	-				-0.2
2,645,485	-				+0.5
2,645,485	-				-0.4
2,645,485	-				+0.4
2,645,485	-				-1.1
2,645,900	+		Pf6N2E2_2233	0.58	+0.4
2,645,900	+		Pf6N2E2_2233	0.58	-1.7
2,645,900	+		Pf6N2E2_2233	0.58	-1.2
2,645,922	+		Pf6N2E2_2233	0.61	+0.3
2,645,922	+		Pf6N2E2_2233	0.61	-0.0
2,645,922	+		Pf6N2E2_2233	0.61	-1.4
2,645,922	+		Pf6N2E2_2233	0.61	+0.1
2,645,923	-		Pf6N2E2_2233	0.61	-0.2
2,645,923	-		Pf6N2E2_2233	0.61	+0.7
2,645,935	-		Pf6N2E2_2233	0.63	+0.8
2,645,935	-		Pf6N2E2_2233	0.63	-0.5
2,645,941	+		Pf6N2E2_2233	0.63	-0.8
2,645,942	-		Pf6N2E2_2233	0.64	+1.1
2,645,956	+		Pf6N2E2_2233	0.65	+1.6
2,645,957	-		Pf6N2E2_2233	0.65	+1.1
2,645,968	+		Pf6N2E2_2233	0.67	-0.2
2,645,968	+		Pf6N2E2_2233	0.67	-0.7
2,645,969	-		Pf6N2E2_2233	0.67	-0.4
2,645,969	-		Pf6N2E2_2233	0.67	+0.1
2,646,113	-		Pf6N2E2_2233	0.84	-0.3
2,646,113	-		Pf6N2E2_2233	0.84	+0.5
2,646,123	+		Pf6N2E2_2233	0.86	+1.1
2,646,123	+		Pf6N2E2_2233	0.86	-0.4
2,646,123	+		Pf6N2E2_2233	0.86	-0.7
2,646,123	+		Pf6N2E2_2233	0.86	+1.3
2,646,123	+		Pf6N2E2_2233	0.86	+0.9
2,646,124	-		Pf6N2E2_2233	0.86	+0.4
2,646,124	-		Pf6N2E2_2233	0.86	-0.8
2,646,124	-		Pf6N2E2_2233	0.86	-1.0
2,646,126	+		Pf6N2E2_2233	0.86	-0.3
2,646,127	-		Pf6N2E2_2233	0.86	-0.1
2,646,150	+		Pf6N2E2_2233	0.89	+1.2
2,646,150	+		Pf6N2E2_2233	0.89	+1.0
2,646,151	-		Pf6N2E2_2233	0.89	-0.2
2,646,151	-		Pf6N2E2_2233	0.89	+0.7
2,646,151	-		Pf6N2E2_2233	0.89	+1.4
2,646,160	+				-0.2
2,646,309	+				-0.0
2,646,309	+				-0.5
2,646,327	+				+1.1
2,646,362	-				-0.8
2,646,379	+				+0.7
2,646,386	+				+0.4
2,646,386	+				+1.1
2,646,386	+				+1.6
2,646,386	+				-1.8
2,646,387	-				+0.3
2,646,387	-				+0.3
2,646,387	-				+1.0
2,646,387	-				-1.8
2,646,387	-				+0.5
2,646,387	-				-0.7
2,646,387	-				-1.1
2,646,390	+				-0.4
2,646,429	+				-0.6
2,646,429	+				+0.5
2,646,429	+				-0.8
2,646,430	-				+0.9
2,646,430	-				+1.6
2,646,430	-				+1.8
2,646,437	-				-1.1
2,646,437	-				+0.4
2,646,667	+		Pf6N2E2_2234	0.47	+0.8
2,646,667	+		Pf6N2E2_2234	0.47	-0.2
2,646,667	+		Pf6N2E2_2234	0.47	+0.6
2,646,667	+		Pf6N2E2_2234	0.47	-0.4
2,646,667	+		Pf6N2E2_2234	0.47	+1.7
2,646,667	+		Pf6N2E2_2234	0.47	-0.2
2,646,667	+		Pf6N2E2_2234	0.47	+0.4
2,646,667	+		Pf6N2E2_2234	0.47	+0.2
2,646,667	+		Pf6N2E2_2234	0.47	+1.8
2,646,668	-		Pf6N2E2_2234	0.47	-1.0
2,646,668	-		Pf6N2E2_2234	0.47	+0.4
2,646,668	-		Pf6N2E2_2234	0.47	+0.5
2,646,668	-		Pf6N2E2_2234	0.47	+1.5
2,646,668	-		Pf6N2E2_2234	0.47	-0.6
2,646,668	-		Pf6N2E2_2234	0.47	-0.2
2,646,685	+		Pf6N2E2_2234	0.52	-0.2
2,646,685	+		Pf6N2E2_2234	0.52	-1.2
2,646,685	+		Pf6N2E2_2234	0.52	-0.2
2,646,685	+		Pf6N2E2_2234	0.52	+0.0
2,646,685	+		Pf6N2E2_2234	0.52	+0.2
2,646,685	+		Pf6N2E2_2234	0.52	-1.1
2,646,685	+		Pf6N2E2_2234	0.52	-0.4
2,646,706	+		Pf6N2E2_2234	0.58	+0.8
2,646,706	+		Pf6N2E2_2234	0.58	+1.0
2,646,707	-		Pf6N2E2_2234	0.58	+1.0
2,646,707	-		Pf6N2E2_2234	0.58	+0.1
2,646,709	+		Pf6N2E2_2234	0.59	-0.5
2,646,709	+		Pf6N2E2_2234	0.59	-0.8
2,646,709	+		Pf6N2E2_2234	0.59	+0.9
2,646,710	-		Pf6N2E2_2234	0.59	-0.8
2,646,730	+		Pf6N2E2_2234	0.65	-0.4
2,646,730	+		Pf6N2E2_2234	0.65	-0.1
2,646,731	-		Pf6N2E2_2234	0.65	-0.4
2,646,734	-		Pf6N2E2_2234	0.66	+0.4
2,646,734	-		Pf6N2E2_2234	0.66	+0.5
2,646,751	+		Pf6N2E2_2234	0.71	+2.2
2,646,751	+		Pf6N2E2_2234	0.71	-0.9
2,646,751	+		Pf6N2E2_2234	0.71	+1.5
2,646,751	+		Pf6N2E2_2234	0.71	+0.3
2,646,751	+		Pf6N2E2_2234	0.71	+0.3
2,646,751	+		Pf6N2E2_2234	0.71	+0.8
2,646,751	+		Pf6N2E2_2234	0.71	+0.6
2,646,751	+		Pf6N2E2_2234	0.71	+0.2
2,646,751	+		Pf6N2E2_2234	0.71	+0.5
2,646,751	+		Pf6N2E2_2234	0.71	+0.4
2,646,751	+		Pf6N2E2_2234	0.71	+0.4
2,646,751	+		Pf6N2E2_2234	0.71	+0.3
2,646,752	-		Pf6N2E2_2234	0.71	-0.2
2,646,752	-		Pf6N2E2_2234	0.71	+0.3
2,646,752	-		Pf6N2E2_2234	0.71	+1.1
2,646,752	-		Pf6N2E2_2234	0.71	+0.3
2,646,752	-		Pf6N2E2_2234	0.71	+0.9
2,646,752	-		Pf6N2E2_2234	0.71	+1.0
2,646,755	+		Pf6N2E2_2234	0.72	-0.1
2,646,755	+		Pf6N2E2_2234	0.72	+1.0
2,646,756	-		Pf6N2E2_2234	0.72	+0.5
2,646,769	+		Pf6N2E2_2234	0.76	+1.4
2,646,769	+		Pf6N2E2_2234	0.76	-0.1
2,646,769	+		Pf6N2E2_2234	0.76	+0.1
2,646,769	+		Pf6N2E2_2234	0.76	-0.2
2,646,770	-		Pf6N2E2_2234	0.76	+0.4
2,646,770	-		Pf6N2E2_2234	0.76	+0.7
2,646,772	+		Pf6N2E2_2234	0.77	-0.1
2,646,772	+		Pf6N2E2_2234	0.77	+0.5
2,646,790	+		Pf6N2E2_2234	0.82	+0.8
2,646,791	-		Pf6N2E2_2234	0.82	-1.8
2,646,793	+		Pf6N2E2_2234	0.83	+1.2
2,646,811	+		Pf6N2E2_2234	0.88	+0.5
2,646,812	-		Pf6N2E2_2234	0.88	+0.4
2,646,812	-		Pf6N2E2_2234	0.88	-0.9
2,646,814	+		Pf6N2E2_2234	0.89	-0.4
2,646,814	+		Pf6N2E2_2234	0.89	+1.0
2,646,814	+		Pf6N2E2_2234	0.89	+0.2
2,646,814	+		Pf6N2E2_2234	0.89	+0.8
2,646,814	+		Pf6N2E2_2234	0.89	+0.3
2,646,814	+		Pf6N2E2_2234	0.89	+0.6
2,646,815	-		Pf6N2E2_2234	0.89	-0.2
2,646,815	-		Pf6N2E2_2234	0.89	-0.7
2,646,815	-		Pf6N2E2_2234	0.89	-0.2
2,646,815	-		Pf6N2E2_2234	0.89	+0.5
2,646,815	-		Pf6N2E2_2234	0.89	+0.6
2,646,818	-				-0.7
2,647,141	+				+0.8
2,647,141	+				-0.2
2,647,142	-				-1.2
2,647,142	-				-1.5
2,647,142	-				-0.8
2,647,142	-				+1.0
2,647,142	-				-0.1
2,647,156	-				+0.8
2,647,156	-				-0.5